RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 UFD1Q92890 307 aa15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 GFOD1Q9NXC2 390 aa15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 TPRKBQ9Y3C4 175 aa15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 LRRC42Q9Y546 428 aa15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 NOTCH3Q9UM47 2321 aa15.83■□□□□ 0.12
SHROOM1-204ENST00000440118 FAM90A10PA6NDY2 464 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 FAM90A18PA6NE21 464 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 FAM90A16PA6NEW6 464 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 FAM90A20PA6NIJ5 464 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 FAM90A7PA6NKC0 464 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 FAM90A12PA8MX19 464 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 FAM90A5PA8MXJ8 464 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 FAM90A23PA8MXZ1 464 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 G3V4G9 280 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 C15orf65H3BRN8 121 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 MPIG6BO95866 241 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 FAM90A15PP0C7V4 464 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 FAM90A13PP0C7W8 464 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 FAM90A14PP0C7W9 464 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 FAM90A24PP0C7X0 464 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 INSL4Q14641 139 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 GLT8D1Q68CQ7 371 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 TRAT1Q6PIZ9 186 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 TMEM104Q8NE00 496 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 WIPF2Q8TF74 440 aaPredicted RBP15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 KCNIP1Q9NZI2 227 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 GHRLQ9UBU3 117 aa15.82■□□□□ 0.12
SHROOM1-204ENST00000440118 UBE2QL1A1L167 161 aa15.81■□□□□ 0.12
SHROOM1-204ENST00000440118 C12orf77C9JDV5 145 aa15.81■□□□□ 0.12
SHROOM1-204ENST00000440118 UBBP0CG47 229 aa15.81■□□□□ 0.12
SHROOM1-204ENST00000440118 HSMCR30P0CW71 290 aa15.81■□□□□ 0.12
SHROOM1-204ENST00000440118 FUT3P21217 361 aa15.81■□□□□ 0.12
SHROOM1-204ENST00000440118 TMEM30BQ3MIR4 351 aa15.81■□□□□ 0.12
SHROOM1-204ENST00000440118 HSD17B12Q53GQ0 312 aa15.81■□□□□ 0.12
SHROOM1-204ENST00000440118 RNLSQ5VYX0 342 aa15.81■□□□□ 0.12
SHROOM1-204ENST00000440118 CEACAM19Q7Z692 300 aa15.81■□□□□ 0.12
SHROOM1-204ENST00000440118 OR10V1Q8NGI7 309 aa15.81■□□□□ 0.12
SHROOM1-204ENST00000440118 Q96M66 194 aa15.81■□□□□ 0.12
SHROOM1-204ENST00000440118 CCDC90BQ9GZT6 254 aa15.81■□□□□ 0.12
SHROOM1-204ENST00000440118 Q9H521 79 aa15.81■□□□□ 0.12
SHROOM1-204ENST00000440118 IGHV1-3A0A0C4DH29 117 aa15.8■□□□□ 0.12
SHROOM1-204ENST00000440118 PDCD6O75340 191 aa15.8■□□□□ 0.12
SHROOM1-204ENST00000440118 CA11O75493 328 aa15.8■□□□□ 0.12
SHROOM1-204ENST00000440118 PF4P02776 101 aa15.8■□□□□ 0.12
SHROOM1-204ENST00000440118 HSPA13P48723 471 aa15.8■□□□□ 0.12
SHROOM1-204ENST00000440118 ZNF816Q0VGE8 651 aaPredicted RBP15.8■□□□□ 0.12
SHROOM1-204ENST00000440118 FAM27D1Q5T7N8 215 aa15.8■□□□□ 0.12
SHROOM1-204ENST00000440118 LIPKQ5VXJ0 399 aa15.8■□□□□ 0.12
SHROOM1-204ENST00000440118 PHYHIPQ92561 330 aa15.8■□□□□ 0.12
SHROOM1-204ENST00000440118 NEDD4LQ96PU5 975 aa15.8■□□□□ 0.12
SHROOM1-204ENST00000440118 TSSC4Q9Y5U2 329 aaPredicted RBP15.8■□□□□ 0.12
SHROOM1-204ENST00000440118 IGHV3-72A0A0B4J1Y9 119 aa15.79■□□□□ 0.12
SHROOM1-204ENST00000440118 PSMB11A5LHX3 300 aa15.79■□□□□ 0.12
SHROOM1-204ENST00000440118 FAM90A9PA6NNJ1 464 aa15.79■□□□□ 0.12
SHROOM1-204ENST00000440118 NCBP2LA6PVI3 153 aaKnown RBP15.79■□□□□ 0.12
SHROOM1-204ENST00000440118 HBZP02008 142 aa15.79■□□□□ 0.12
SHROOM1-204ENST00000440118 AMY1AP04745 511 aa15.79■□□□□ 0.12
SHROOM1-204ENST00000440118 AMY2AP04746 511 aa15.79■□□□□ 0.12
SHROOM1-204ENST00000440118 CD33P20138 364 aa15.79■□□□□ 0.12
SHROOM1-204ENST00000440118 CD83Q01151 205 aa15.79■□□□□ 0.12
SHROOM1-204ENST00000440118 OR1L1Q8NH94 360 aa15.79■□□□□ 0.12
SHROOM1-204ENST00000440118 NRG4Q8WWG1 115 aa15.79■□□□□ 0.12
SHROOM1-204ENST00000440118 TMEM59Q9BXS4 323 aa15.79■□□□□ 0.12
SHROOM1-204ENST00000440118 ADARB2-AS1A8MUL3 147 aa15.78■□□□□ 0.12
SHROOM1-204ENST00000440118 SERPINE3A8MV23 424 aa15.78■□□□□ 0.12
SHROOM1-204ENST00000440118 FGF16O43320 207 aa15.78■□□□□ 0.12
SHROOM1-204ENST00000440118 TXNL1O43396 289 aa15.78■□□□□ 0.12
SHROOM1-204ENST00000440118 RGS10O43665 173 aa15.78■□□□□ 0.12
SHROOM1-204ENST00000440118 GLAP06280 429 aa15.78■□□□□ 0.12
SHROOM1-204ENST00000440118 LOXL3P58215 753 aa15.78■□□□□ 0.12
SHROOM1-204ENST00000440118 Q3ZCU0 254 aa15.78■□□□□ 0.12
SHROOM1-204ENST00000440118 TGIF2LXQ8IUE1 241 aa15.78■□□□□ 0.12
SHROOM1-204ENST00000440118 LINC00311Q8N616 119 aa15.78■□□□□ 0.12
SHROOM1-204ENST00000440118 C5orf56Q8N8D9 126 aa15.78■□□□□ 0.12
SHROOM1-204ENST00000440118 C8orf31Q8N9H6 132 aa15.78■□□□□ 0.12
SHROOM1-204ENST00000440118 SGCDQ92629 289 aa15.78■□□□□ 0.12
SHROOM1-204ENST00000440118 TMEM203Q969S6 136 aa15.78■□□□□ 0.12
SHROOM1-204ENST00000440118 TAF9BQ9HBM6 251 aa15.78■□□□□ 0.12
SHROOM1-204ENST00000440118 OR2S2Q9NQN1 319 aa15.78■□□□□ 0.12
SHROOM1-204ENST00000440118 LSM2Q9Y333 95 aaKnown RBP15.78■□□□□ 0.12
SHROOM1-204ENST00000440118 RCC1P18754 421 aaPredicted RBP15.77■□□□□ 0.12
SHROOM1-204ENST00000440118 MYF6P23409 242 aa15.77■□□□□ 0.12
SHROOM1-204ENST00000440118 HTR2CP28335 458 aa15.77■□□□□ 0.12
SHROOM1-204ENST00000440118 SLC35A2P78381 396 aa15.77■□□□□ 0.12
SHROOM1-204ENST00000440118 SAMD5Q5TGI4 173 aa15.77■□□□□ 0.12
SHROOM1-204ENST00000440118 FAM53AQ6NSI3 398 aaPredicted RBP15.77■□□□□ 0.12
SHROOM1-204ENST00000440118 FOXRED2Q8IWF2 684 aa15.77■□□□□ 0.12
SHROOM1-204ENST00000440118 IZUMO1Q8IYV9 350 aa15.77■□□□□ 0.12
SHROOM1-204ENST00000440118 OR2T10Q8NGZ9 312 aa15.77■□□□□ 0.12
SHROOM1-204ENST00000440118 RTN4IP1Q8WWV3 396 aaPredicted RBP15.77■□□□□ 0.12
SHROOM1-204ENST00000440118 PLGRKTQ9HBL7 147 aa15.77■□□□□ 0.12
SHROOM1-204ENST00000440118 CHMP1AQ9HD42 196 aaPredicted RBP15.77■□□□□ 0.12
SHROOM1-204ENST00000440118 PRKDCP78527 4128 aaKnown RBP15.76■□□□□ 0.11
SHROOM1-204ENST00000440118 SLC31A2O15432 143 aa15.76■□□□□ 0.11
SHROOM1-204ENST00000440118 SC5DO75845 299 aa15.76■□□□□ 0.11
SHROOM1-204ENST00000440118 SRMP19623 302 aa15.76■□□□□ 0.11
SHROOM1-204ENST00000440118 SLC35B1P78383 322 aa15.76■□□□□ 0.11
SHROOM1-204ENST00000440118 BEAN1Q3B7T3 259 aa15.76■□□□□ 0.11
SHROOM1-204ENST00000440118 OR10K2Q6IF99 312 aa15.76■□□□□ 0.11
SHROOM1-204ENST00000440118 UNQ9370/PRO34162Q6UXP9 181 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms