RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 IGLL1P15814 213 aa16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 MGMTP16455 207 aa16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 SYT6Q5T7P8 510 aaPredicted RBP16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 AWAT2Q6E213 333 aa16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 MOB3BQ86TA1 216 aa16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 IZUMO1Q8IYV9 350 aa16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 SGCDQ92629 289 aa16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 THRSPQ92748 146 aa16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 TFAP2CQ92754 450 aa16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 Q96M66 194 aa16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 SELENOIQ9C0D9 397 aa16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 ETAA1Q9NY74 926 aa16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 TRAPPC2LQ9UL33 140 aa16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 PEX16Q9Y5Y5 336 aa16.07■□□□□ 0.16
NCKIPSD-206ENST00000439518 IGHV3-43A0A0B4J1X8 118 aa16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 SC5DO75845 299 aa16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 IGHG2P01859 326 aa16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 GLAP06280 429 aa16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 IGHV3-43DP0DP04 118 aa16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 TMEM30BQ3MIR4 351 aa16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 SIGIRRQ6IA17 410 aa16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 ZNF329Q86UD4 541 aa16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 Q8N6K4 173 aa16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 NKAIN3Q8N8D7 197 aa16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 ZNF439Q8NDP4 499 aa16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 OR4K15Q8NH41 348 aa16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 CHPT1Q8WUD6 406 aa16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 RTN4IP1Q8WWV3 396 aaPredicted RBP16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 EAF1Q96JC9 268 aaPredicted RBP16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 NOL4LQ96MY1 436 aaPredicted RBP16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 UQCC2Q9BRT2 126 aa16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 ERGIC3Q9Y282 383 aa16.06■□□□□ 0.16
NCKIPSD-206ENST00000439518 IGHV3-72A0A0B4J1Y9 119 aa16.05■□□□□ 0.16
NCKIPSD-206ENST00000439518 SLC31A2O15432 143 aa16.05■□□□□ 0.16
NCKIPSD-206ENST00000439518 SPINT2O43291 252 aa16.05■□□□□ 0.16
NCKIPSD-206ENST00000439518 CA11O75493 328 aa16.05■□□□□ 0.16
NCKIPSD-206ENST00000439518 CRTAPO75718 401 aaPredicted RBP16.05■□□□□ 0.16
NCKIPSD-206ENST00000439518 PF4P02776 101 aa16.05■□□□□ 0.16
NCKIPSD-206ENST00000439518 FUT3P21217 361 aa16.05■□□□□ 0.16
NCKIPSD-206ENST00000439518 MAPK3P27361 379 aaPredicted RBP16.05■□□□□ 0.16
NCKIPSD-206ENST00000439518 ZNF137PP52743 207 aa16.05■□□□□ 0.16
NCKIPSD-206ENST00000439518 GP2P55259 537 aaKnown RBP16.05■□□□□ 0.16
NCKIPSD-206ENST00000439518 FOXB2Q5VYV0 432 aa16.05■□□□□ 0.16
NCKIPSD-206ENST00000439518 RNLSQ5VYX0 342 aa16.05■□□□□ 0.16
NCKIPSD-206ENST00000439518 UNQ9370/PRO34162Q6UXP9 181 aa16.05■□□□□ 0.16
NCKIPSD-206ENST00000439518 SLC25A48Q6ZT89 311 aaKnown RBP16.05■□□□□ 0.16
NCKIPSD-206ENST00000439518 CYYR1Q96J86 154 aa16.05■□□□□ 0.16
NCKIPSD-206ENST00000439518 RAB9BQ9NP90 201 aa16.05■□□□□ 0.16
NCKIPSD-206ENST00000439518 AURKAIP1Q9NWT8 199 aaPredicted RBP16.05■□□□□ 0.16
NCKIPSD-206ENST00000439518 SERPINE3A8MV23 424 aa16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 HBZP02008 142 aa16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 CDK1P06493 297 aa16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 RCC1P18754 421 aaPredicted RBP16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 IL3RAP26951 378 aa16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 VHLP40337 213 aa16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 ZNF134P52741 427 aa16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 INSL4Q14641 139 aa16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 CT45A1Q5HYN5 189 aa16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 KHDC1LQ5JSQ8 128 aa16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 C6orf183Q5T699 404 aa16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 TGIF2LXQ8IUE1 241 aa16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 OR2T10Q8NGZ9 312 aa16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 OR1L1Q8NH94 360 aa16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 CT45A3Q8NHU0 189 aa16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 PLSCR3Q9NRY6 295 aa16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 GNG12Q9UBI6 72 aa16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 GHRLQ9UBU3 117 aa16.04■□□□□ 0.16
NCKIPSD-206ENST00000439518 DNAH3Q8TD57 4116 aa16.03■□□□□ 0.16
NCKIPSD-206ENST00000439518 CD1BP29016 333 aa16.03■□□□□ 0.16
NCKIPSD-206ENST00000439518 SLC35A2P78381 396 aa16.03■□□□□ 0.16
NCKIPSD-206ENST00000439518 ACSM3Q53FZ2 586 aa16.03■□□□□ 0.16
NCKIPSD-206ENST00000439518 STEAP3Q658P3 488 aa16.03■□□□□ 0.16
NCKIPSD-206ENST00000439518 TRAT1Q6PIZ9 186 aa16.03■□□□□ 0.16
NCKIPSD-206ENST00000439518 SLC35E3Q7Z769 313 aa16.03■□□□□ 0.16
NCKIPSD-206ENST00000439518 MRAPQ8TCY5 172 aa16.03■□□□□ 0.16
NCKIPSD-206ENST00000439518 VCXQ9H320 206 aa16.03■□□□□ 0.16
NCKIPSD-206ENST00000439518 MBNL3Q9NUK0 354 aaKnown RBP16.03■□□□□ 0.16
NCKIPSD-206ENST00000439518 LSM2Q9Y333 95 aaKnown RBP16.03■□□□□ 0.16
NCKIPSD-206ENST00000439518 UBE2QL1A1L167 161 aa16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 LINC01548A6NM66 108 aa16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 ZNF736B4DX44 427 aaPredicted RBP16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 ANKRD65E5RJM6 399 aa16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 H0YHG0 523 aa16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 PDCD6O75340 191 aa16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 RPL23AP62750 156 aaKnown RBP16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 GPR50Q13585 617 aa16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 C6orf141Q5SZD1 244 aa16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 FAM27D1Q5T7N8 215 aa16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 ETV3LQ6ZN32 361 aa16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 MS4A15Q8N5U1 240 aa16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 LINC00482Q8N8I6 264 aa16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 Q8N9W7 124 aa16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 FAM46BQ96A09 425 aa16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 RCC1LQ96I51 464 aaKnown RBP16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 MND1Q9BWT6 205 aa16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 ABCG5Q9H222 651 aa16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 TAF9BQ9HBM6 251 aa16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 LIN7CQ9NUP9 197 aaKnown RBP16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 LINC00527Q9UJ94 153 aa16.02■□□□□ 0.16
NCKIPSD-206ENST00000439518 NCBP2LA6PVI3 153 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms