RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 IL24Q13007 206 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 ICAM4Q14773 271 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 PCSK4Q6UW60 755 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 DPPA3Q6W0C5 159 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 LINC00596Q86U02 117 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 NEK7Q8TDX7 302 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 ATP5SQ99766 215 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 RIMS4Q9H426 269 aaPredicted RBP13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 BOKQ9UMX3 212 aaPredicted RBP13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 LIPGQ9Y5X9 500 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 ZNF503-AS2A6NEH8 195 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 SCAF4O95104 1147 aaKnown RBP13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 F10P00742 488 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 IFNA17P01571 189 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 HSPB1P04792 205 aaKnown RBP13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 CCL2P13500 99 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 RUNX1Q01196 453 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 ZNF154Q13106 437 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 ATP1A1-AS1Q5TC04 95 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 C9orf135Q5VTT2 229 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 TMEM217Q8N7C4 229 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 PRRG4Q9BZD6 226 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 A0A087WWC5 75 aa13.97□□□□□ -0.17
CLCNKA-203ENST00000439316 ZNHIT1O43257 154 aa13.97□□□□□ -0.17
CLCNKA-203ENST00000439316 SYNGR1O43759 233 aa13.97□□□□□ -0.17
CLCNKA-203ENST00000439316 NQO2P16083 231 aa13.97□□□□□ -0.17
CLCNKA-203ENST00000439316 F2RP25116 425 aa13.97□□□□□ -0.17
CLCNKA-203ENST00000439316 LHX2P50458 406 aa13.97□□□□□ -0.17
CLCNKA-203ENST00000439316 TAS2R30P59541 319 aa13.97□□□□□ -0.17
CLCNKA-203ENST00000439316 HAGHQ16775 308 aa13.97□□□□□ -0.17
CLCNKA-203ENST00000439316 AKR1C8PQ5T2L2 129 aa13.97□□□□□ -0.17
CLCNKA-203ENST00000439316 VASH2Q86V25 355 aa13.97□□□□□ -0.17
CLCNKA-203ENST00000439316 OR5A2Q8NGI9 324 aa13.97□□□□□ -0.17
CLCNKA-203ENST00000439316 RAB39BQ96DA2 213 aa13.97□□□□□ -0.17
CLCNKA-203ENST00000439316 PLK3Q9H4B4 646 aa13.97□□□□□ -0.17
CLCNKA-203ENST00000439316 LAMA5O15230 3695 aa13.96□□□□□ -0.17
CLCNKA-203ENST00000439316 A0A0G2JRQ6 117 aa13.96□□□□□ -0.17
CLCNKA-203ENST00000439316 WRBO00258 174 aa13.96□□□□□ -0.17
CLCNKA-203ENST00000439316 CLN5O75503 358 aa13.96□□□□□ -0.17
CLCNKA-203ENST00000439316 NXPH3O95157 252 aa13.96□□□□□ -0.17
CLCNKA-203ENST00000439316 FABP1P07148 127 aa13.96□□□□□ -0.17
CLCNKA-203ENST00000439316 SLC25A6P12236 298 aa13.96□□□□□ -0.17
CLCNKA-203ENST00000439316 FOXG1P55316 489 aaPredicted RBP13.96□□□□□ -0.17
CLCNKA-203ENST00000439316 ZNF324BQ6AW86 544 aaPredicted RBP13.96□□□□□ -0.17
CLCNKA-203ENST00000439316 ZNF880Q6PDB4 577 aa13.96□□□□□ -0.17
CLCNKA-203ENST00000439316 ZNF295-AS1Q8N0V1 137 aa13.96□□□□□ -0.17
CLCNKA-203ENST00000439316 CLDND2Q8NHS1 167 aa13.96□□□□□ -0.17
CLCNKA-203ENST00000439316 TCTEX1D2Q8WW35 142 aa13.96□□□□□ -0.17
CLCNKA-203ENST00000439316 RBMXL1Q96E39 390 aaKnown RBP13.96□□□□□ -0.17
CLCNKA-203ENST00000439316 ZNF552Q9H707 407 aaPredicted RBP13.96□□□□□ -0.17
CLCNKA-203ENST00000439316 ZNF703Q9H7S9 590 aaPredicted RBP13.96□□□□□ -0.17
CLCNKA-203ENST00000439316 TNFSF12O43508 249 aa13.96□□□□□ -0.18
CLCNKA-203ENST00000439316 HBE1P02100 147 aa13.96□□□□□ -0.18
CLCNKA-203ENST00000439316 WNT2P09544 360 aa13.96□□□□□ -0.18
CLCNKA-203ENST00000439316 CLDN18P56856 261 aa13.96□□□□□ -0.18
CLCNKA-203ENST00000439316 TLE4Q04727 773 aa13.96□□□□□ -0.18
CLCNKA-203ENST00000439316 SRSF6Q13247 344 aaKnown RBP13.96□□□□□ -0.18
CLCNKA-203ENST00000439316 IGF2-ASQ6U949 168 aa13.96□□□□□ -0.18
CLCNKA-203ENST00000439316 C20orf204Q6ZNR8 217 aa13.96□□□□□ -0.18
CLCNKA-203ENST00000439316 TUSC5Q8IXB3 177 aa13.96□□□□□ -0.18
CLCNKA-203ENST00000439316 H1FOOQ8IZA3 346 aaPredicted RBP13.96□□□□□ -0.18
CLCNKA-203ENST00000439316 CABLES2Q9BTV7 478 aa13.96□□□□□ -0.18
CLCNKA-203ENST00000439316 OR2W1Q9Y3N9 320 aa13.96□□□□□ -0.18
CLCNKA-203ENST00000439316 PIGBOS1A0A0B4J2F0 54 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 CD300LBA8K4G0 201 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 KIAA1324LA8MWY0 1029 aaPredicted RBP13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 H0YL77 283 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 SLC33A1O00400 549 aaPredicted RBP13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 DFFBO76075 338 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 NGFP01138 241 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 S100GP29377 79 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 EIF2S3P41091 472 aaKnown RBP13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 HLA-DRB3P79483 266 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 SRYQ05066 204 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 SPINK14Q6IE38 97 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 CYB561D1Q8N8Q1 229 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 OR5P3Q8WZ94 311 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 GPR146Q96CH1 333 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 POM121L2Q96KW2 1035 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 FER1L6-AS2Q96M78 137 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 OPA3Q9H6K4 179 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 CALHM2Q9HA72 323 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 NIT2Q9NQR4 276 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 GSN-AS1Q9NRJ2 163 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 LRFN1Q9P244 771 aa13.95□□□□□ -0.18
CLCNKA-203ENST00000439316 TRAV1-1A0A0B4J248 108 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 TRAV24A0A0B4J272 114 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 A0A1B0GU03 582 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 LINC00587B1AMM8 73 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 TXNL1O43396 289 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 PPIHO43447 177 aaKnown RBP13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 TAGLN2P37802 199 aaKnown RBP13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 UBE2KP61086 200 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 NHLH1Q02575 133 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 ABHD17BQ5VST6 288 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 STX12Q86Y82 276 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 OR2M7Q8NG81 312 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 HIST1H2AAQ96QV6 131 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 FAM173AQ9BQD7 235 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 WSB1Q9Y6I7 421 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms