RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SLC25A30Q5SVS4 291 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 ZNF343Q6P1L6 599 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 HAGHLQ6PII5 290 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 PLET1Q6UQ28 207 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 SCIMPQ6UWF3 145 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 ZNF620Q6ZNG0 422 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 NOTCH2NLQ7Z3S9 236 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 CDC20BQ86Y33 519 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 CIARTQ8N365 385 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 ZNF283Q8N7M2 679 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR13A1Q8NGR1 328 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR10G6Q8NH81 332 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 LMO3Q8TAP4 145 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 FAM151AQ8WW52 585 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 ST6GAL2Q96JF0 529 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 RNF157Q96PX1 679 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 SPACA5Q96QH8 159 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR2M4Q96R27 311 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR5M11Q96RB7 305 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 HIST1H4GQ99525 98 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 PRSS27Q9BQR3 290 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 TMEM126AQ9H061 195 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 EBF2Q9HAK2 575 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 ACER3Q9NUN7 267 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 RBFOX1Q9NWB1 397 aaKnown RBP2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 RSL24D1Q9UHA3 163 aaKnown RBP2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 GNG8Q9UK08 70 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 RARRES3Q9UL19 164 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 SIGLEC7Q9Y286 467 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 U3KQ87 197 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 SMCHD1A6NHR9 2005 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 RALGAPA1Q6GYQ0 2036 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 SPEF2Q9C093 1822 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 CAMTA1Q9Y6Y1 1673 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 UGGT2Q9NYU1 1516 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 FAM135BQ49AJ0 1406 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 FGD6Q6ZV73 1430 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 MIA2Q96PC5 1412 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 NOTCH3Q9UM47 2321 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 IGHV3OR16-13A0A075B7E8 117 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 BORCS7-ASMTA0A0B4J1R7 106 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 A0A1B0GX51 115 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 PLAC8L1A1L4L8 177 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 TMEM189A5PLL7 270 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 SIGLEC16A6NMB1 481 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 FAM220BPB1ANY3 271 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 H3BP45 60 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 K7ERU9 68 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 TP53I11O14683 189 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 PIAS1O75925 651 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 KBTBD11O94819 623 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 CA2P00918 260 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 APOA2P02652 100 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 CSN2P05814 226 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 H2AFZP0C0S5 128 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 TSPAN19P0C672 248 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR8U8P0C7N1 319 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 IGLL1P15814 213 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 RPL7P18124 248 aaKnown RBP2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 VDAC1P21796 283 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 RPS3P23396 243 aaKnown RBP eCLIP2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 DDTP30046 118 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 VDAC2P45880 294 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 AKR1D1P51857 326 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 EMP1P54849 157 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 NCALDP61601 193 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 RPS24P62847 133 aaKnown RBP2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 PLCXD2Q0VAA5 305 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 LAMTOR4Q0VGL1 99 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 PNOCQ13519 176 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 RUNX3Q13761 415 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 FZD2Q14332 565 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 LTC4SQ16873 150 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 C17orf58Q2M2W7 97 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 TMEM236Q5W0B7 351 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 ZNF613Q6PF04 617 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 CLEC19AQ6UXS0 136 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 TMEM179BQ7Z7N9 219 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 SLC30A7Q8NEW0 376 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR8B12Q8NGG6 310 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 JOSD2Q8TAC2 188 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 ZNF675Q8TD23 568 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 CANT1Q8WVQ1 401 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR5P3Q8WZ94 311 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 FAM3DQ96BQ1 224 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 RPUSD4Q96CM3 377 aaKnown RBP2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR7D2Q96RA2 312 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 SLC25A31Q9H0C2 315 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 C6orf106Q9H6K1 298 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 NIT2Q9NQR4 276 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 SPANXCQ9NY87 97 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 RBM12B-AS1Q9P1G2 102 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 CLCF1Q9UBD9 225 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 SSR3Q9UNL2 185 aa2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 PHF3Q92576 2039 aaKnown RBP2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 BRCA1P38398 1863 aaKnown RBP2.79□□□□□ -1.96
HMGB1P12-201ENST00000438594 BCL9O00512 1426 aa2.78□□□□□ -1.96
HMGB1P12-201ENST00000438594 CHD5Q8TDI0 1954 aa2.78□□□□□ -1.96
HMGB1P12-201ENST00000438594 RLFQ13129 1914 aa2.78□□□□□ -1.96
HMGB1P12-201ENST00000438594 TRAV36DV7A0A075B6V5 113 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms