RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 RSBN1Q5VWQ0 802 aaPredicted RBP6.13□□□□□ -1.43
VPS50-204ENST00000438395 ETV3LQ6ZN32 361 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 LINC00596Q86U02 117 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 TGIF2LXQ8IUE1 241 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 IZUMO1Q8IYV9 350 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 STPG2Q8N412 459 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 SUMF2Q8NBJ7 301 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 OR51A2Q8NGJ7 313 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 OR5M8Q8NGP6 311 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 OR52N1Q8NH53 320 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 PLPPR1Q8TBJ4 325 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 RNF141Q8WVD5 230 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 TFAP2CQ92754 450 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 TMEM106AQ96A25 262 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 WWC2-AS2Q96NR7 200 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 B9D2Q9BPU9 175 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 RSRP1Q9BUV0 290 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 C9orf16Q9BUW7 83 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 LINC00574Q9H8X3 128 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 SPACA1Q9HBV2 294 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 AMBNQ9NP70 447 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 TMEM138Q9NPI0 162 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 LIN7CQ9NUP9 197 aaKnown RBP6.13□□□□□ -1.43
VPS50-204ENST00000438395 CHCHD3Q9NX63 227 aaKnown RBP6.13□□□□□ -1.43
VPS50-204ENST00000438395 KIAA2026Q5HYC2 2103 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 IGHV1-3A0A0C4DH29 117 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 IRGMA1A4Y4 181 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 FAM90A18PA6NE21 464 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 FAM90A16PA6NEW6 464 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 FAM90A20PA6NIJ5 464 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 FAM90A9PA6NNJ1 464 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 FAM90A12PA8MX19 464 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 FAM90A5PA8MXJ8 464 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 E9PI62 339 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 MOSP00540 346 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 FAM90A15PP0C7V4 464 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 FAM90A13PP0C7W8 464 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 FAM90A14PP0C7W9 464 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 FAM90A24PP0C7X0 464 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 BDKRB2P30411 391 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 SOX6P35712 828 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 ZNF816Q0VGE8 651 aaPredicted RBP6.12□□□□□ -1.43
VPS50-204ENST00000438395 FOXE3Q13461 319 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 RIPK1Q13546 671 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 GPR50Q13585 617 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 GPR176Q14439 515 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 MPV17LQ2QL34 196 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 TMEM30BQ3MIR4 351 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 CCDC58Q4VC31 144 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 NHLRC3Q5JS37 347 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 UTF1Q5T230 341 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 C6orf183Q5T699 404 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 C9orf66Q5T8R8 295 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 RPL22L1Q6P5R6 122 aaKnown RBP6.12□□□□□ -1.43
VPS50-204ENST00000438395 TMEM65Q6PI78 240 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 ZNF555Q8NEP9 628 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 OR8H1Q8NGG4 311 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 OR52M1Q8NGK5 317 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 OR52I1Q8NGK6 324 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 CCDC107Q8WV48 283 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 EAF1Q96JC9 268 aaPredicted RBP6.12□□□□□ -1.43
VPS50-204ENST00000438395 IL36GQ9NZH8 169 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 TRAPPC2LQ9UL33 140 aa6.12□□□□□ -1.43
VPS50-204ENST00000438395 SIRT4Q9Y6E7 314 aaPredicted RBP6.12□□□□□ -1.43
VPS50-204ENST00000438395 IGHV3-43A0A0B4J1X8 118 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 SEC14L6B5MCN3 397 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 MCRIP1C9JLW8 97 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 H0YHG0 523 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 GEMIN2O14893 280 aaKnown RBP6.11□□□□□ -1.43
VPS50-204ENST00000438395 ORC5O43913 435 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 LY86O95711 162 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 ELANEP08246 267 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 NHLRC4P0CG21 123 aaPredicted RBP6.11□□□□□ -1.43
VPS50-204ENST00000438395 CGB3P0DN86 165 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 CGB7P0DN87 165 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 IGHV3-43DP0DP04 118 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 CD1BP29016 333 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 LUMP51884 338 aaPredicted RBP6.11□□□□□ -1.43
VPS50-204ENST00000438395 DIAPH2-AS1Q14236 149 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 MMDQ15546 238 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 DEFB136Q30KP8 78 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 TRAT1Q6PIZ9 186 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 LCNL1Q6ZST4 164 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 C18orf65Q6ZTR6 163 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 PRR18Q8N4B5 295 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 JAGN1Q8N5M9 183 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 C8orf31Q8N9H6 132 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 RHOXF1Q8NHV9 184 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 UBALD1Q8TB05 177 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 RTN4IP1Q8WWV3 396 aaPredicted RBP6.11□□□□□ -1.43
VPS50-204ENST00000438395 RAX2Q96IS3 184 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 DUX3Q96PT4 197 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 P2RX4Q99571 388 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 ZNF184Q99676 751 aaPredicted RBP6.11□□□□□ -1.43
VPS50-204ENST00000438395 ABCG5Q9H222 651 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 IFT22Q9H7X7 185 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 GFOD1Q9NXC2 390 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 ETAA1Q9NY74 926 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 KCNIP1Q9NZI2 227 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 AASSQ9UDR5 926 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms