RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 MOSP00540 346 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 FAM90A15PP0C7V4 464 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 FAM90A13PP0C7W8 464 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 FAM90A14PP0C7W9 464 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 FAM90A24PP0C7X0 464 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 BDKRB2P30411 391 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 SOX6P35712 828 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 ZNF816Q0VGE8 651 aaPredicted RBP6.12□□□□□ -1.43
VPS50-203ENST00000436177 FOXE3Q13461 319 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 RIPK1Q13546 671 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 GPR50Q13585 617 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 GPR176Q14439 515 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 MPV17LQ2QL34 196 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 TMEM30BQ3MIR4 351 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 CCDC58Q4VC31 144 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 NHLRC3Q5JS37 347 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 UTF1Q5T230 341 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 C6orf183Q5T699 404 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 C9orf66Q5T8R8 295 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 RPL22L1Q6P5R6 122 aaKnown RBP6.12□□□□□ -1.43
VPS50-203ENST00000436177 TMEM65Q6PI78 240 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 ZNF555Q8NEP9 628 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 OR8H1Q8NGG4 311 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 OR52M1Q8NGK5 317 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 OR52I1Q8NGK6 324 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 CCDC107Q8WV48 283 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 EAF1Q96JC9 268 aaPredicted RBP6.12□□□□□ -1.43
VPS50-203ENST00000436177 IL36GQ9NZH8 169 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 TRAPPC2LQ9UL33 140 aa6.12□□□□□ -1.43
VPS50-203ENST00000436177 SIRT4Q9Y6E7 314 aaPredicted RBP6.12□□□□□ -1.43
VPS50-203ENST00000436177 IGHV3-43A0A0B4J1X8 118 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 SEC14L6B5MCN3 397 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 MCRIP1C9JLW8 97 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 H0YHG0 523 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 GEMIN2O14893 280 aaKnown RBP6.11□□□□□ -1.43
VPS50-203ENST00000436177 ORC5O43913 435 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 LY86O95711 162 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 RPLP1P05386 114 aaKnown RBP6.11□□□□□ -1.43
VPS50-203ENST00000436177 ELANEP08246 267 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 NHLRC4P0CG21 123 aaPredicted RBP6.11□□□□□ -1.43
VPS50-203ENST00000436177 CGB3P0DN86 165 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 CGB7P0DN87 165 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 IGHV3-43DP0DP04 118 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 CD1BP29016 333 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 LUMP51884 338 aaPredicted RBP6.11□□□□□ -1.43
VPS50-203ENST00000436177 DIAPH2-AS1Q14236 149 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 MMDQ15546 238 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 DEFB136Q30KP8 78 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 TRAT1Q6PIZ9 186 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 LCNL1Q6ZST4 164 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 C18orf65Q6ZTR6 163 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 PRR18Q8N4B5 295 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 JAGN1Q8N5M9 183 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 C8orf31Q8N9H6 132 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 RHOXF1Q8NHV9 184 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 UBALD1Q8TB05 177 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 RTN4IP1Q8WWV3 396 aaPredicted RBP6.11□□□□□ -1.43
VPS50-203ENST00000436177 RAX2Q96IS3 184 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 DUX3Q96PT4 197 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 P2RX4Q99571 388 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 ZNF184Q99676 751 aaPredicted RBP6.11□□□□□ -1.43
VPS50-203ENST00000436177 ABCG5Q9H222 651 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 IFT22Q9H7X7 185 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 GFOD1Q9NXC2 390 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 ETAA1Q9NY74 926 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 KCNIP1Q9NZI2 227 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 AASSQ9UDR5 926 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 U3KQK5 164 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 DSCAML1Q8TD84 2053 aa6.11□□□□□ -1.43
VPS50-203ENST00000436177 LOC100130705A0A1B0GUX0 176 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 MYF6P23409 242 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 DCKP27707 260 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 ECI1P42126 302 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 GTF2A1P52655 376 aaPredicted RBP6.1□□□□□ -1.43
VPS50-203ENST00000436177 EBI3Q14213 229 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 Q3ZCU0 254 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 AWAT2Q6E213 333 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 RAB12Q6IQ22 244 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 ZNF529Q6P280 563 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 ASCL4Q6XD76 172 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 ZNF497Q6ZNH5 498 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 LINC00311Q8N616 119 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 Q8NFD4 153 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 OR10V1Q8NGI7 309 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 C4orf3Q8WVX3 66 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 RGP1Q92546 391 aaPredicted RBP6.1□□□□□ -1.43
VPS50-203ENST00000436177 SMIM19Q96E16 107 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 S1PR3Q99500 378 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 DCLRE1BQ9H816 532 aa6.1□□□□□ -1.43
VPS50-203ENST00000436177 ZNF107Q9UII5 783 aaPredicted RBP6.1□□□□□ -1.43
VPS50-203ENST00000436177 MRPS28Q9Y2Q9 187 aaKnown RBP6.1□□□□□ -1.43
VPS50-203ENST00000436177 EXOSC1Q9Y3B2 195 aaKnown RBP6.1□□□□□ -1.43
VPS50-203ENST00000436177 COL7A1Q02388 2944 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 A6NHS1 94 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 C12orf77C9JDV5 145 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 H3BNX3 289 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 C15orf65H3BRN8 121 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 CA11O75493 328 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 RGS11O94810 467 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 IGHG4P01861 327 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms