RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 LSM10Q969L4 123 aaKnown RBP11.16□□□□□ -0.62
SCRN1-207ENST00000434476 BSCL2Q96G97 398 aaPredicted RBP11.16□□□□□ -0.62
SCRN1-207ENST00000434476 TSNAXQ99598 290 aaKnown RBP11.16□□□□□ -0.62
SCRN1-207ENST00000434476 SEC11CQ9BY50 192 aa11.16□□□□□ -0.62
SCRN1-207ENST00000434476 TREM1Q9NP99 234 aa11.16□□□□□ -0.62
SCRN1-207ENST00000434476 LYRM2Q9NU23 88 aaPredicted RBP11.16□□□□□ -0.62
SCRN1-207ENST00000434476 UQCC1Q9NVA1 299 aa11.16□□□□□ -0.62
SCRN1-207ENST00000434476 COQ3Q9NZJ6 369 aa11.16□□□□□ -0.62
SCRN1-207ENST00000434476 SHANK1Q9Y566 2161 aa11.15□□□□□ -0.62
SCRN1-207ENST00000434476 IGHV2OR16-5A0A0B4J2B6 119 aa11.15□□□□□ -0.62
SCRN1-207ENST00000434476 RNASEK-C17orf49H0YIS7 233 aa11.15□□□□□ -0.62
SCRN1-207ENST00000434476 IFNL4K9M1U5 179 aa11.15□□□□□ -0.62
SCRN1-207ENST00000434476 MLNRO43193 412 aa11.15□□□□□ -0.62
SCRN1-207ENST00000434476 TIMM8AO60220 97 aaPredicted RBP11.15□□□□□ -0.62
SCRN1-207ENST00000434476 PITX3O75364 302 aa11.15□□□□□ -0.62
SCRN1-207ENST00000434476 POLR2GP62487 172 aaKnown RBP eCLIP11.15□□□□□ -0.62
SCRN1-207ENST00000434476 ZNF266Q14584 549 aa11.15□□□□□ -0.62
SCRN1-207ENST00000434476 C3orf36Q3SXR2 165 aa11.15□□□□□ -0.62
SCRN1-207ENST00000434476 CXorf66Q5JRM2 361 aaPredicted RBP11.15□□□□□ -0.62
SCRN1-207ENST00000434476 ZBTB34Q8NCN2 500 aa11.15□□□□□ -0.62
SCRN1-207ENST00000434476 SNIP1Q8TAD8 396 aaKnown RBP11.15□□□□□ -0.62
SCRN1-207ENST00000434476 IL1F10Q8WWZ1 152 aa11.15□□□□□ -0.62
SCRN1-207ENST00000434476 NKX6-2Q9C056 277 aaPredicted RBP11.15□□□□□ -0.62
SCRN1-207ENST00000434476 TOLLIPQ9H0E2 274 aa11.15□□□□□ -0.62
SCRN1-207ENST00000434476 SEBOXQ9HB31 216 aaPredicted RBP11.15□□□□□ -0.62
SCRN1-207ENST00000434476 LUZP4Q9P127 313 aa11.15□□□□□ -0.62
SCRN1-207ENST00000434476 OR1A1Q9P1Q5 309 aa11.15□□□□□ -0.62
SCRN1-207ENST00000434476 IGHV1-18A0A0C4DH31 117 aa11.14□□□□□ -0.63
SCRN1-207ENST00000434476 FAM24AA6NFZ4 105 aa11.14□□□□□ -0.63
SCRN1-207ENST00000434476 RNF212BA8MTL3 300 aa11.14□□□□□ -0.63
SCRN1-207ENST00000434476 F8W036 122 aa11.14□□□□□ -0.63
SCRN1-207ENST00000434476 DNASE2O00115 360 aaPredicted RBP11.14□□□□□ -0.63
SCRN1-207ENST00000434476 HSPA12AO43301 675 aa11.14□□□□□ -0.63
SCRN1-207ENST00000434476 CRYABP02511 175 aaKnown RBP11.14□□□□□ -0.63
SCRN1-207ENST00000434476 CD5P06127 495 aa11.14□□□□□ -0.63
SCRN1-207ENST00000434476 BAXQ07812 192 aa11.14□□□□□ -0.63
SCRN1-207ENST00000434476 MSMO1Q15800 293 aa11.14□□□□□ -0.63
SCRN1-207ENST00000434476 ACP7Q6ZNF0 438 aa11.14□□□□□ -0.63
SCRN1-207ENST00000434476 SEM1Q6ZVN7 128 aa11.14□□□□□ -0.63
SCRN1-207ENST00000434476 TMEM252Q8N6L7 170 aa11.14□□□□□ -0.63
SCRN1-207ENST00000434476 OPN3Q9H1Y3 402 aaPredicted RBP11.14□□□□□ -0.63
SCRN1-207ENST00000434476 CACFD1Q9UGQ2 172 aa11.14□□□□□ -0.63
SCRN1-207ENST00000434476 SLC25A15Q9Y619 301 aa11.14□□□□□ -0.63
SCRN1-207ENST00000434476 OTOGLQ3ZCN5 2332 aa11.14□□□□□ -0.63
SCRN1-207ENST00000434476 IGSF23A1L1A6 192 aa11.13□□□□□ -0.63
SCRN1-207ENST00000434476 OOEPA6NGQ2 149 aa11.13□□□□□ -0.63
SCRN1-207ENST00000434476 C3orf80F5H4A9 247 aa11.13□□□□□ -0.63
SCRN1-207ENST00000434476 TRIM77I1YAP6 450 aa11.13□□□□□ -0.63
SCRN1-207ENST00000434476 WRBO00258 174 aa11.13□□□□□ -0.63
SCRN1-207ENST00000434476 TSPAN4O14817 238 aa11.13□□□□□ -0.63
SCRN1-207ENST00000434476 TNFSF12O43508 249 aa11.13□□□□□ -0.63
SCRN1-207ENST00000434476 IGLV2-14P01704 120 aa11.13□□□□□ -0.63
SCRN1-207ENST00000434476 CEACAM6P40199 344 aa11.13□□□□□ -0.63
SCRN1-207ENST00000434476 NBL1P41271 181 aa11.13□□□□□ -0.63
SCRN1-207ENST00000434476 FABP6P51161 128 aa11.13□□□□□ -0.63
SCRN1-207ENST00000434476 DVL1P1P54792 670 aaPredicted RBP11.13□□□□□ -0.63
SCRN1-207ENST00000434476 SRSF3P84103 164 aaKnown RBP11.13□□□□□ -0.63
SCRN1-207ENST00000434476 CLEC9AQ6UXN8 241 aa11.13□□□□□ -0.63
SCRN1-207ENST00000434476 Q6ZRG5 221 aa11.13□□□□□ -0.63
SCRN1-207ENST00000434476 PRSS33Q8NF86 280 aa11.13□□□□□ -0.63
SCRN1-207ENST00000434476 GPR146Q96CH1 333 aa11.13□□□□□ -0.63
SCRN1-207ENST00000434476 LIN7CQ9NUP9 197 aaKnown RBP11.13□□□□□ -0.63
SCRN1-207ENST00000434476 PROB1E7EW31 1015 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 CHST1O43916 411 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 SSSCA1O60232 199 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 SNAPINO95295 136 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 TSPAN15O95858 294 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 PSG2P11465 335 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 MUC1P15941 1255 aaPredicted RBP11.12□□□□□ -0.63
SCRN1-207ENST00000434476 AKR1C2P52895 323 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 AKR1C1Q04828 323 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 TIMM23BQ5SRD1 257 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 WDR82Q6UXN9 313 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 Q6ZR03 302 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 GALMQ96C23 342 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 RAB40CQ96S21 281 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 GPHA2Q96T91 129 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 OR14J1Q9UGF5 321 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 RNF115Q9Y4L5 304 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 RBM7Q9Y580 266 aaKnown RBP11.12□□□□□ -0.63
SCRN1-207ENST00000434476 MUC3AQ02505 3323 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 TRAV39A0A0B4J263 110 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 A6NLC8 198 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 UMAD1C9J7I0 102 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 PSPNO60542 156 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 PTBP3O95758 552 aaKnown RBP11.12□□□□□ -0.63
SCRN1-207ENST00000434476 OR8U9P0C7N5 309 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 ADCYAP1P18509 176 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 TIMP3P35625 211 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 CAMLGP49069 296 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 ARHGDIBP52566 201 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 RPL23AP62750 156 aaKnown RBP11.12□□□□□ -0.63
SCRN1-207ENST00000434476 PAX5Q02548 391 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 SMIM21Q3B7S5 101 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 KRTCAP3Q53RY4 240 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 C1orf185Q5T7R7 199 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 ZNF826PQ6ZT77 177 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 FAM90A1Q86YD7 464 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 OR10Z1Q8NGY1 313 aa11.12□□□□□ -0.63
SCRN1-207ENST00000434476 OR8U1Q8NH10 309 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms