RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ZBTB34Q8NCN2 500 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 RXFP4Q8TDU9 374 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 EGLN1Q9GZT9 426 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 HIPK2Q9H2X6 1198 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 RPS10P5Q9NQ39 176 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 KCNIP1Q9NZI2 227 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 TAAR3PQ9P1P4 343 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 CLCF1Q9UBD9 225 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 RNF115Q9Y4L5 304 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 RBM7Q9Y580 266 aaKnown RBP8.84□□□□□ -0.99
CD44-210ENST00000434472 COLCA2A8K830 154 aa8.83□□□□□ -1
CD44-210ENST00000434472 TXNL1O43396 289 aa8.83□□□□□ -1
CD44-210ENST00000434472 C1QL1O75973 258 aa8.83□□□□□ -1
CD44-210ENST00000434472 CRYBA1P05813 215 aa8.83□□□□□ -1
CD44-210ENST00000434472 PSG2P11465 335 aa8.83□□□□□ -1
CD44-210ENST00000434472 CBR1P16152 277 aa8.83□□□□□ -1
CD44-210ENST00000434472 IGHV1-2P23083 117 aa8.83□□□□□ -1
CD44-210ENST00000434472 OMGP23515 440 aa8.83□□□□□ -1
CD44-210ENST00000434472 HOXC12P31275 282 aa8.83□□□□□ -1
CD44-210ENST00000434472 TAS2R30P59541 319 aa8.83□□□□□ -1
CD44-210ENST00000434472 TRIP6Q15654 476 aaKnown RBP8.83□□□□□ -1
CD44-210ENST00000434472 AWAT1Q58HT5 328 aa8.83□□□□□ -1
CD44-210ENST00000434472 Q6ZT83 130 aa8.83□□□□□ -1
CD44-210ENST00000434472 FAM214BQ7L5A3 538 aa8.83□□□□□ -1
CD44-210ENST00000434472 C1orf162Q8NEQ5 155 aaPredicted RBP8.83□□□□□ -1
CD44-210ENST00000434472 OR1J1Q8NGS3 322 aa8.83□□□□□ -1
CD44-210ENST00000434472 OR51H1Q8NH63 302 aa8.83□□□□□ -1
CD44-210ENST00000434472 SLC25A40Q8TBP6 338 aa8.83□□□□□ -1
CD44-210ENST00000434472 IL1F10Q8WWZ1 152 aa8.83□□□□□ -1
CD44-210ENST00000434472 OR2J1Q9GZK6 312 aa8.83□□□□□ -1
CD44-210ENST00000434472 MBNL3Q9NUK0 354 aaKnown RBP8.83□□□□□ -1
CD44-210ENST00000434472 KIAA1456Q9P272 454 aa8.83□□□□□ -1
CD44-210ENST00000434472 WSB1Q9Y6I7 421 aa8.83□□□□□ -1
CD44-210ENST00000434472 TMEM30CPA0ZSE6 113 aa8.83□□□□□ -1
CD44-210ENST00000434472 C7orf77A4D0Y5 90 aa8.83□□□□□ -1
CD44-210ENST00000434472 RBFOX3A6NFN3 312 aa8.83□□□□□ -1
CD44-210ENST00000434472 C1orf196B1AJZ1 125 aa8.83□□□□□ -1
CD44-210ENST00000434472 FAM90A26D6RGX4 464 aa8.83□□□□□ -1
CD44-210ENST00000434472 M0R036 132 aa8.83□□□□□ -1
CD44-210ENST00000434472 AQP7O14520 342 aa8.83□□□□□ -1
CD44-210ENST00000434472 CST7O76096 145 aa8.83□□□□□ -1
CD44-210ENST00000434472 TMEM50AO95807 157 aa8.83□□□□□ -1
CD44-210ENST00000434472 MT-ND4LP03901 98 aa8.83□□□□□ -1
CD44-210ENST00000434472 IFNA4P05014 189 aa8.83□□□□□ -1
CD44-210ENST00000434472 SNRNP70P08621 437 aaKnown RBP8.83□□□□□ -1
CD44-210ENST00000434472 EPHA1P21709 976 aa8.83□□□□□ -1
CD44-210ENST00000434472 PPP1CCP36873 323 aaKnown RBP8.83□□□□□ -1
CD44-210ENST00000434472 FHITP49789 147 aa8.83□□□□□ -1
CD44-210ENST00000434472 ASCL1P50553 236 aa8.83□□□□□ -1
CD44-210ENST00000434472 IDH3GP51553 393 aaPredicted RBP8.83□□□□□ -1
CD44-210ENST00000434472 PAX9P55771 341 aa8.83□□□□□ -1
CD44-210ENST00000434472 TESK1Q15569 626 aa8.83□□□□□ -1
CD44-210ENST00000434472 MSMO1Q15800 293 aa8.83□□□□□ -1
CD44-210ENST00000434472 ATP1A1-AS1Q5TC04 95 aa8.83□□□□□ -1
CD44-210ENST00000434472 WDR86Q86TI4 376 aa8.83□□□□□ -1
CD44-210ENST00000434472 ODF3L1Q8IXM7 274 aa8.83□□□□□ -1
CD44-210ENST00000434472 LINC00518Q8N0U6 118 aa8.83□□□□□ -1
CD44-210ENST00000434472 TMEM171Q8WVE6 324 aa8.83□□□□□ -1
CD44-210ENST00000434472 RBMXL1Q96E39 390 aaKnown RBP8.83□□□□□ -1
CD44-210ENST00000434472 C14orf79Q96F83 325 aa8.83□□□□□ -1
CD44-210ENST00000434472 CXXC4Q9H2H0 198 aa8.83□□□□□ -1
CD44-210ENST00000434472 OR1A1Q9P1Q5 309 aa8.83□□□□□ -1
CD44-210ENST00000434472 RNF150Q9ULK6 438 aa8.83□□□□□ -1
CD44-210ENST00000434472 FBXO7Q9Y3I1 522 aa8.83□□□□□ -1
CD44-210ENST00000434472 R4GN57 208 aa8.83□□□□□ -1
CD44-210ENST00000434472 ARHGAP21Q5T5U3 1957 aa8.82□□□□□ -1
CD44-210ENST00000434472 SHANK1Q9Y566 2161 aa8.82□□□□□ -1
CD44-210ENST00000434472 MEX3AA1L020 520 aaKnown RBP8.82□□□□□ -1
CD44-210ENST00000434472 CDIPTO14735 213 aa8.82□□□□□ -1
CD44-210ENST00000434472 SYNGR2O43760 224 aa8.82□□□□□ -1
CD44-210ENST00000434472 HAND1O96004 215 aa8.82□□□□□ -1
CD44-210ENST00000434472 OR8U8P0C7N1 319 aa8.82□□□□□ -1
CD44-210ENST00000434472 ZNF154Q13106 437 aa8.82□□□□□ -1
CD44-210ENST00000434472 GUSBP1Q15486 140 aa8.82□□□□□ -1
CD44-210ENST00000434472 AKIRIN2Q53H80 203 aa8.82□□□□□ -1
CD44-210ENST00000434472 SOHLH1Q5JUK2 328 aa8.82□□□□□ -1
CD44-210ENST00000434472 SLC35E4Q6ICL7 350 aa8.82□□□□□ -1
CD44-210ENST00000434472 SLC25A24Q6NUK1 477 aa8.82□□□□□ -1
CD44-210ENST00000434472 SPSB3Q6PJ21 355 aa8.82□□□□□ -1
CD44-210ENST00000434472 C1orf174Q8IYL3 243 aa8.82□□□□□ -1
CD44-210ENST00000434472 SCGB1C1Q8TD33 95 aa8.82□□□□□ -1
CD44-210ENST00000434472 SARAFQ96BY9 339 aa8.82□□□□□ -1
CD44-210ENST00000434472 TRIB1Q96RU8 372 aa8.82□□□□□ -1
CD44-210ENST00000434472 GPHA2Q96T91 129 aa8.82□□□□□ -1
CD44-210ENST00000434472 PARD6GQ9BYG4 376 aaPredicted RBP8.82□□□□□ -1
CD44-210ENST00000434472 HES4Q9HCC6 221 aa8.82□□□□□ -1
CD44-210ENST00000434472 KCNS2Q9ULS6 477 aa8.82□□□□□ -1
CD44-210ENST00000434472 PPP1R3CQ9UQK1 317 aa8.82□□□□□ -1
CD44-210ENST00000434472 TRAV1-1A0A0B4J248 108 aa8.81□□□□□ -1
CD44-210ENST00000434472 TRAV17A0A0B4J275 112 aa8.81□□□□□ -1
CD44-210ENST00000434472 A0A0G2JRQ6 117 aa8.81□□□□□ -1
CD44-210ENST00000434472 A0A1W2PR80 420 aa8.81□□□□□ -1
CD44-210ENST00000434472 KIAA1324LA8MWY0 1029 aaPredicted RBP8.81□□□□□ -1
CD44-210ENST00000434472 CELA3BP08861 270 aa8.81□□□□□ -1
CD44-210ENST00000434472 PTAFRP25105 342 aa8.81□□□□□ -1
CD44-210ENST00000434472 CEACAM6P40199 344 aa8.81□□□□□ -1
CD44-210ENST00000434472 HBG1P69891 147 aa8.81□□□□□ -1
CD44-210ENST00000434472 HBG2P69892 147 aa8.81□□□□□ -1
CD44-210ENST00000434472 MZT1Q08AG7 82 aa8.81□□□□□ -1
CD44-210ENST00000434472 PSG7Q13046 419 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms