RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 RAB40BQ12829 278 aa11.62□□□□□ -0.55
PRKDC-203ENST00000432581 ZNF497Q6ZNH5 498 aa11.62□□□□□ -0.55
PRKDC-203ENST00000432581 SLC25A48Q6ZT89 311 aaKnown RBP11.62□□□□□ -0.55
PRKDC-203ENST00000432581 STX19Q8N4C7 294 aa11.62□□□□□ -0.55
PRKDC-203ENST00000432581 OR11H1Q8NG94 326 aa11.62□□□□□ -0.55
PRKDC-203ENST00000432581 GPR148Q8TDV2 347 aa11.62□□□□□ -0.55
PRKDC-203ENST00000432581 NEK7Q8TDX7 302 aa11.62□□□□□ -0.55
PRKDC-203ENST00000432581 CCDC107Q8WV48 283 aa11.62□□□□□ -0.55
PRKDC-203ENST00000432581 TMEM138Q9NPI0 162 aa11.62□□□□□ -0.55
PRKDC-203ENST00000432581 SMAD5-AS1Q9Y6J3 95 aa11.62□□□□□ -0.55
PRKDC-203ENST00000432581 IGHV3-43A0A0B4J1X8 118 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 ZNF736B4DX44 427 aaPredicted RBP11.61□□□□□ -0.55
PRKDC-203ENST00000432581 AIPO00170 330 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 SPINT2O43291 252 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 CIB2O75838 187 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 LY86O95711 162 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 MT-ND4P03905 459 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 IGHV3-43DP0DP04 118 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 GABRB1P18505 474 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 ZNF93P35789 620 aaPredicted RBP11.61□□□□□ -0.55
PRKDC-203ENST00000432581 ALDH3A2P51648 485 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 ZIK1Q3SY52 487 aaPredicted RBP11.61□□□□□ -0.55
PRKDC-203ENST00000432581 ATAD3CQ5T2N8 411 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 UBALD1Q8TB05 177 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 MYOZ3Q8TDC0 251 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 RGP1Q92546 391 aaPredicted RBP11.61□□□□□ -0.55
PRKDC-203ENST00000432581 TMEM106AQ96A25 262 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 UBE2E2Q96LR5 201 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 SPACA1Q9HBV2 294 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 GNG12Q9UBI6 72 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 AASSQ9UDR5 926 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 ZNF107Q9UII5 783 aaPredicted RBP11.61□□□□□ -0.55
PRKDC-203ENST00000432581 GMPPBQ9Y5P6 360 aa11.61□□□□□ -0.55
PRKDC-203ENST00000432581 SLC31A2O15432 143 aa11.6□□□□□ -0.55
PRKDC-203ENST00000432581 GTF2F2P13984 249 aa11.6□□□□□ -0.55
PRKDC-203ENST00000432581 SERPINA2P20848 420 aa11.6□□□□□ -0.55
PRKDC-203ENST00000432581 F2RL1P55085 397 aa11.6□□□□□ -0.55
PRKDC-203ENST00000432581 RUNX1Q01196 453 aa11.6□□□□□ -0.55
PRKDC-203ENST00000432581 CCDC58Q4VC31 144 aa11.6□□□□□ -0.55
PRKDC-203ENST00000432581 FAM27D1Q5T7N8 215 aa11.6□□□□□ -0.55
PRKDC-203ENST00000432581 DDI2Q5TDH0 399 aa11.6□□□□□ -0.55
PRKDC-203ENST00000432581 STEAP3Q658P3 488 aa11.6□□□□□ -0.55
PRKDC-203ENST00000432581 TMEM65Q6PI78 240 aa11.6□□□□□ -0.55
PRKDC-203ENST00000432581 ZNF439Q8NDP4 499 aa11.6□□□□□ -0.55
PRKDC-203ENST00000432581 OR1N2Q8NGR9 330 aa11.6□□□□□ -0.55
PRKDC-203ENST00000432581 MUC7Q8TAX7 377 aa11.6□□□□□ -0.55
PRKDC-203ENST00000432581 AMBNQ9NP70 447 aa11.6□□□□□ -0.55
PRKDC-203ENST00000432581 VSIG4Q9Y279 399 aa11.6□□□□□ -0.55
PRKDC-203ENST00000432581 C12orf77C9JDV5 145 aa11.59□□□□□ -0.55
PRKDC-203ENST00000432581 BDKRB2P30411 391 aa11.59□□□□□ -0.55
PRKDC-203ENST00000432581 VHLP40337 213 aa11.59□□□□□ -0.55
PRKDC-203ENST00000432581 GTF2A1P52655 376 aaPredicted RBP11.59□□□□□ -0.55
PRKDC-203ENST00000432581 ZNF616Q08AN1 781 aa11.59□□□□□ -0.55
PRKDC-203ENST00000432581 GPR176Q14439 515 aa11.59□□□□□ -0.55
PRKDC-203ENST00000432581 MMDQ15546 238 aa11.59□□□□□ -0.55
PRKDC-203ENST00000432581 CASC10Q5T4H9 136 aa11.59□□□□□ -0.55
PRKDC-203ENST00000432581 C6orf183Q5T699 404 aa11.59□□□□□ -0.55
PRKDC-203ENST00000432581 SYT6Q5T7P8 510 aaPredicted RBP11.59□□□□□ -0.55
PRKDC-203ENST00000432581 FAM53AQ6NSI3 398 aaPredicted RBP11.59□□□□□ -0.55
PRKDC-203ENST00000432581 RPL22L1Q6P5R6 122 aaKnown RBP11.59□□□□□ -0.55
PRKDC-203ENST00000432581 TRAT1Q6PIZ9 186 aa11.59□□□□□ -0.55
PRKDC-203ENST00000432581 ZNF429Q86V71 674 aa11.59□□□□□ -0.55
PRKDC-203ENST00000432581 ZNF491Q8N8L2 437 aa11.59□□□□□ -0.55
PRKDC-203ENST00000432581 OR52I1Q8NGK6 324 aa11.59□□□□□ -0.55
PRKDC-203ENST00000432581 RHOXF1Q8NHV9 184 aa11.59□□□□□ -0.55
PRKDC-203ENST00000432581 PYDC1Q8WXC3 89 aa11.59□□□□□ -0.55
PRKDC-203ENST00000432581 MRPS18AQ9NVS2 196 aaKnown RBP11.59□□□□□ -0.55
PRKDC-203ENST00000432581 TRAPPC2LQ9UL33 140 aa11.59□□□□□ -0.55
PRKDC-203ENST00000432581 RPL36Q9Y3U8 105 aaKnown RBP11.59□□□□□ -0.55
PRKDC-203ENST00000432581 MCRIP1C9JLW8 97 aa11.58□□□□□ -0.56
PRKDC-203ENST00000432581 I3L521 148 aa11.58□□□□□ -0.56
PRKDC-203ENST00000432581 LANCL1O43813 399 aa11.58□□□□□ -0.56
PRKDC-203ENST00000432581 SLC2A2P11168 524 aaPredicted RBP11.58□□□□□ -0.56
PRKDC-203ENST00000432581 MYF6P23409 242 aa11.58□□□□□ -0.56
PRKDC-203ENST00000432581 PPIFP30405 207 aaKnown RBP11.58□□□□□ -0.56
PRKDC-203ENST00000432581 ZNF134P52741 427 aa11.58□□□□□ -0.56
PRKDC-203ENST00000432581 LSAMPQ13449 338 aa11.58□□□□□ -0.56
PRKDC-203ENST00000432581 RIPK1Q13546 671 aa11.58□□□□□ -0.56
PRKDC-203ENST00000432581 SLC22A6Q4U2R8 563 aa11.58□□□□□ -0.56
PRKDC-203ENST00000432581 CT45A1Q5HYN5 189 aa11.58□□□□□ -0.56
PRKDC-203ENST00000432581 CT45A3Q8NHU0 189 aa11.58□□□□□ -0.56
PRKDC-203ENST00000432581 GNB4Q9HAV0 340 aa11.58□□□□□ -0.56
PRKDC-203ENST00000432581 ETAA1Q9NY74 926 aa11.58□□□□□ -0.56
PRKDC-203ENST00000432581 RCC2Q9P258 522 aaKnown RBP11.58□□□□□ -0.56
PRKDC-203ENST00000432581 IGLV1-40P01703 118 aa11.57□□□□□ -0.56
PRKDC-203ENST00000432581 HBZP02008 142 aa11.57□□□□□ -0.56
PRKDC-203ENST00000432581 LIMS3P0CW19 117 aa11.57□□□□□ -0.56
PRKDC-203ENST00000432581 LIMS4P0CW20 117 aa11.57□□□□□ -0.56
PRKDC-203ENST00000432581 KIAA0141Q14154 515 aaPredicted RBP11.57□□□□□ -0.56
PRKDC-203ENST00000432581 CBR4Q8N4T8 237 aa11.57□□□□□ -0.56
PRKDC-203ENST00000432581 OR10V1Q8NGI7 309 aa11.57□□□□□ -0.56
PRKDC-203ENST00000432581 MRPS24Q96EL2 167 aaKnown RBP11.57□□□□□ -0.56
PRKDC-203ENST00000432581 RCHY1Q96PM5 261 aa11.57□□□□□ -0.56
PRKDC-203ENST00000432581 ZNF184Q99676 751 aaPredicted RBP11.57□□□□□ -0.56
PRKDC-203ENST00000432581 KLK15Q9H2R5 256 aa11.57□□□□□ -0.56
PRKDC-203ENST00000432581 OR51J1Q9H342 316 aa11.57□□□□□ -0.56
PRKDC-203ENST00000432581 ISYNA1Q9NPH2 558 aa11.57□□□□□ -0.56
PRKDC-203ENST00000432581 WSB1Q9Y6I7 421 aa11.57□□□□□ -0.56
PRKDC-203ENST00000432581 A0A1W2PP11 408 aa11.56□□□□□ -0.56
PRKDC-203ENST00000432581 OVOL1O14753 267 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms