RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 SCML1Q9UN30 329 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 SETD2Q9BYW2 2564 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 CACNA1EQ15878 2313 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 PARP14Q460N5 1801 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 FOCADQ5VW36 1801 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 PATJQ8NI35 1801 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 ASCC3Q8N3C0 2202 aaKnown RBP1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 USP9YO00507 2555 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 DOPEY2Q9Y3R5 2298 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 BTNL10A8MVZ5 291 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 F8VP50 259 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 LGALS9O00182 355 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 PLPP3O14495 311 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 CYTH3O43739 400 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 KRT7P08729 469 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 PITPNAQ00169 270 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 MEF2CQ06413 473 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 LY6EQ16553 131 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 ZNF678Q5SXM1 525 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 KPRPQ5T749 579 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 C16orf47Q6ZP98 133 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 NEGR1Q7Z3B1 354 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 PRNTQ86SH4 94 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 STK40Q8N2I9 435 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 SPICQ8N5J4 248 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 TRIML2Q8N7C3 387 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 ZNF555Q8NEP9 628 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 MS4A8Q9BY19 250 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 FRMD8P1Q9BZ68 369 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 OR52A5Q9H2C5 316 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 FBXO6Q9NRD1 293 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 SDHAF2Q9NX18 166 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 TAS2R5Q9NYW4 299 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 MRM2Q9UI43 246 aaKnown RBP1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 PRO0628Q9UI54 55 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 ANXA10Q9UJ72 324 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 CCL26Q9Y258 94 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 KLF13Q9Y2Y9 288 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 ORC6Q9Y5N6 252 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 ATMQ13315 3056 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 MGAQ8IWI9 3026 aa1.72□□□□□ -2.13
HMGB1P27-201ENST00000431429 NAV1Q8NEY1 1877 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 LAMA4Q16363 1823 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 LOC102724200A0A096LPH7 203 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 KIR2DS1A0A191URI9 304 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 A0A1B0GXF2 115 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 A8MWL6 223 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 RNASEK-C17orf49H0YIS7 233 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 I3L4J1 428 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 CDIPTO14735 213 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 RPN2P04844 631 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 OR4Q2P0C623 313 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 COX6B1P14854 86 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 KCNE1P15382 129 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 HMGA1P17096 107 aaKnown RBP1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 CD9P21926 228 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 TEAD1P28347 426 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 DEKP35659 375 aaKnown RBP1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 TNNC1P63316 161 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 IL5RAQ01344 420 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 ZNF404Q494X3 552 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 CLEC12AQ5QGZ9 265 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 IDNKQ5T6J7 187 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 KCTD16Q68DU8 428 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 IGFL1Q6UW32 110 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 CLEC19AQ6UXS0 136 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 ALKAL1Q6UXT8 129 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 CD302Q8IX05 232 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 MIR7-3HGQ8N6C7 128 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 LRRC52Q8N7C0 313 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 APCDD1LQ8NCL9 501 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 CCDC112Q8NEF3 446 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 SLC26A10Q8NG04 563 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 OR51Q1Q8NH59 317 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 OR4C6Q8NH72 309 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 FAM57AQ8TBR7 257 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 DOK4Q8TEW6 326 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 ORAOV1Q8WV07 137 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 TMEM239Q8WW34 195 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 ZNF75AQ96N20 296 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 ACBD6Q9BR61 282 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 SCRT1Q9BWW7 348 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 LCE3DQ9BYE3 92 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 LHX5Q9H2C1 402 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 SLC38A1Q9H2H9 487 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 ASB7Q9H672 318 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 RDH14Q9HBH5 336 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 PRO0461Q9UI25 63 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 GOLGA4Q13439 2230 aaKnown RBP1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 NBPF19A0A087WUL8 3843 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 NUP205Q92621 2012 aa1.71□□□□□ -2.14
HMGB1P27-201ENST00000431429 ITPR2Q14571 2701 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 ATG2AQ2TAZ0 1938 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 NF1P21359 2839 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 A0A1B0GW15 77 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 ISPDA4D126 451 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 RAB19A4D1S5 217 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 OR2AT4A6NND4 320 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 IQCF5A8MTL0 148 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 PRAMEF26H0Y7S4 382 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms