RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 GATAD1Q8WUU5 269 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 GPR146Q96CH1 333 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 C5orf30Q96GV9 206 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 TMPRSS5Q9H3S3 457 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 WDR54Q9H977 334 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 KCNJ16Q9NPI9 418 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 METTL1Q9UBP6 276 aaKnown RBP6.1□□□□□ -1.43
COL28A1-202ENST00000430711 CACNA1DQ01668 2161 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 BORCS7-ASMTA0A0B4J1R7 106 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 PITX3O75364 302 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 PGLYRP1O75594 196 aaPredicted RBP6.1□□□□□ -1.43
COL28A1-202ENST00000430711 TUSC2O75896 110 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 SCAF4O95104 1147 aaKnown RBP6.1□□□□□ -1.43
COL28A1-202ENST00000430711 VAMP5O95183 116 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 CDS2O95674 445 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 IGKV1D-33P01593 117 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 IGKV1-33P01594 117 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 IGKV1-5P01602 117 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 S100A6P06703 90 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 CELA3BP08861 270 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 MMP9P14780 707 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 WNT5AP41221 380 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 FUT6P51993 359 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 HIKESHIQ53FT3 197 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 SOHLH1Q5JUK2 328 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 LCE3BQ5TA77 95 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 GPR157Q5UAW9 335 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 PMS2CLQ68D20 193 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 COLCA1Q6ZS62 124 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 ZNF695Q8IW36 515 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 ZDHHC23Q8IYP9 409 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 ZNF561Q8N587 486 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 OR2V1Q8NHB1 315 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 CLDND2Q8NHS1 167 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 NEK7Q8TDX7 302 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 IL1F10Q8WWZ1 152 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 CLDN23Q96B33 292 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 RHOVQ96L33 236 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 TMEM56Q96MV1 263 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 GGACTQ9BVM4 153 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 C1QTNF5Q9BXJ0 243 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 ATPIF1Q9UII2 106 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 TMEM56-RWDD3S4R434 201 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 CEP250Q9BV73 2442 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 BSNQ9UPA5 3926 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 TMEM8BA6NDV4 472 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 CYSRT1A8MQ03 144 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 AP4M1O00189 453 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 NTN3O00634 580 aaPredicted RBP6.09□□□□□ -1.43
COL28A1-202ENST00000430711 HIST1H2BKO60814 126 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 TRGC2P03986 189 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 HIST1H2BJP06899 126 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 METTL15P1P0C7V9 234 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 BMP5P22003 454 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 HIST1H2BOP23527 126 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 SRD5A2P31213 254 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 HIST1H2BBP33778 126 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 UCP3P55916 312 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 NDUFA6P56556 154 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 HIST1H2BDP58876 126 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 HIST1H2BCP62807 126 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 EIF5AP63241 154 aaKnown RBP6.09□□□□□ -1.43
COL28A1-202ENST00000430711 EIF3IQ13347 325 aaKnown RBP6.09□□□□□ -1.43
COL28A1-202ENST00000430711 HIST2H2BEQ16778 126 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 CLEC12BQ2HXU8 276 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 RNF212Q495C1 297 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 OR2B11Q5JQS5 317 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.09□□□□□ -1.43
COL28A1-202ENST00000430711 FAM90A2PQ658T7 463 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 LCN15Q6UWW0 184 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 TMPRSS7Q7RTY8 843 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 NUFIP2Q7Z417 695 aaKnown RBP6.09□□□□□ -1.43
COL28A1-202ENST00000430711 THNSL2Q86YJ6 484 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 ABHD5Q8WTS1 349 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 HIST1H2BHQ93079 126 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 SPSB4Q96A44 273 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 C10orf35Q96D05 121 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 HIST1H2BNQ99877 126 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 HIST1H2BMQ99879 126 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 ZNF251Q9BRH9 671 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 RPRMQ9NS64 109 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 IL36GQ9NZH8 169 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 DOK5Q9P104 306 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 PRSS50Q9UI38 385 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 TMED3Q9Y3Q3 217 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 TACC2O95359 2948 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 ZFP92A6NM28 416 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 KLK3P07288 261 aaPredicted RBP6.09□□□□□ -1.43
COL28A1-202ENST00000430711 SMIM6P0DI80 62 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 UCP1P25874 307 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 TAGLN2P37802 199 aaKnown RBP6.09□□□□□ -1.43
COL28A1-202ENST00000430711 MAGEA5P43359 124 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 LHX2P50458 406 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 ID3Q02535 119 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 KIAA0141Q14154 515 aaPredicted RBP6.09□□□□□ -1.43
COL28A1-202ENST00000430711 WDR25Q64LD2 544 aaPredicted RBP6.09□□□□□ -1.43
COL28A1-202ENST00000430711 ZNF324BQ6AW86 544 aaPredicted RBP6.09□□□□□ -1.43
COL28A1-202ENST00000430711 TMEM211Q6ICI0 200 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 ZNF880Q6PDB4 577 aa6.09□□□□□ -1.43
COL28A1-202ENST00000430711 ZNF429Q86V71 674 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms