RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 BMP5P22003 454 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 S100PP25815 95 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 PCBD1P61457 104 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 EWSR1Q01844 656 aaKnown RBP eCLIP6.96□□□□□ -1.3
HPS4-205ENST00000429411 CXorf67Q86X51 503 aaPredicted RBP6.96□□□□□ -1.3
HPS4-205ENST00000429411 IL22RA1Q8N6P7 574 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 NECAP1Q8NC96 275 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 SLC24A4Q8NFF2 622 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 TCTEX1D2Q8WW35 142 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 ZCCHC14Q8WYQ9 949 aaKnown RBP6.96□□□□□ -1.3
HPS4-205ENST00000429411 LIME1Q9H400 295 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 PLK3Q9H4B4 646 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 TRAPPC2LQ9UL33 140 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 IGKV1-27A0A075B6S5 117 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 A0A0U1RQV5 110 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 CD300LBA8K4G0 201 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 F8VVB4 439 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 F8VWA3 439 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 ATP6V0CP27449 155 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 SULT1A1P50225 295 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 DYNLT3P51808 116 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 FUT6P51993 359 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 HGFACQ04756 655 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 PRDX4Q13162 271 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 ZNF266Q14584 549 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 SPANXN5Q5MJ07 72 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 ACER2Q5QJU3 275 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 OR2T2Q6IF00 324 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 ZNF808Q8N4W9 903 aaPredicted RBP6.96□□□□□ -1.3
HPS4-205ENST00000429411 OR1K1Q8NGR3 316 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 OR2V1Q8NHB1 315 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 FAM234AQ9H0X4 552 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 TMEM38BQ9NVV0 291 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 ERRFI1Q9UJM3 462 aaPredicted RBP6.96□□□□□ -1.3
HPS4-205ENST00000429411 CREBBPQ92793 2442 aa6.96□□□□□ -1.3
HPS4-205ENST00000429411 ARHGAP21Q5T5U3 1957 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 HECTD1Q9ULT8 2610 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 IGKV1-12A0A0C4DH73 117 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 ANKRD30BLA7E2S9 258 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 IGKV1D-12P01611 117 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 ECI1P42126 302 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 SUCLG1P53597 346 aaKnown RBP6.95□□□□□ -1.3
HPS4-205ENST00000429411 RAB1AP62820 205 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 MST1LQ2TV78 715 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 DCAF12Q5T6F0 453 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 FAM27BQ5VT28 67 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 LOXL4Q96JB6 756 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 TWSG1Q9GZX9 223 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 DEFB127Q9H1M4 99 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 NAV2Q8IVL1 2488 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 IGHV1-45A0A0A0MS14 117 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 OR6C6A6NF89 314 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 C1QTNF9BB2RNN3 333 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 MPPED1O15442 326 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 CHST1O43916 411 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 SOX15O60248 233 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 YIF1AO95070 293 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 IFNA17P01571 189 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 METTL15P1P0C7V9 234 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 C1QTNF9P0C862 333 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 CA6P23280 308 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 LHFPL1Q86WI0 220 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 DMRTC2Q8IXT2 367 aaPredicted RBP6.95□□□□□ -1.3
HPS4-205ENST00000429411 OR2H1Q9GZK4 316 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 CHRNA10Q9GZZ6 450 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 SLC25A31Q9H0C2 315 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 PARP11Q9NR21 331 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 NPIPB13A6NJU9 1138 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 MARCH11A6NNE9 402 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 NPIPB4C9JG80 1138 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 ZNF587BE7ETH6 402 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 H0YL77 283 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 NGFP01138 241 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 S100A8P05109 93 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 APLNRP35414 380 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 FOXG1P55316 489 aaPredicted RBP6.95□□□□□ -1.3
HPS4-205ENST00000429411 SURF2Q15527 256 aaPredicted RBP6.95□□□□□ -1.3
HPS4-205ENST00000429411 SPINK9Q5DT21 86 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 DHRS7BQ6IAN0 325 aaPredicted RBP6.95□□□□□ -1.3
HPS4-205ENST00000429411 ZNF343Q6P1L6 599 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 OR2Y1Q8NGV0 311 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 SDSLQ96GA7 329 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 NIPSNAP3BQ9BS92 247 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 SLC35B3Q9H1N7 401 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 OR51M1Q9H341 326 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 WFDC1Q9HC57 220 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 STARD10Q9Y365 291 aa6.95□□□□□ -1.3
HPS4-205ENST00000429411 ADAMTS9Q9P2N4 1935 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 A0A087WZY1 265 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 SMCO3A2RU48 225 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 CEBPZOSA8MTT3 80 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 CYB5BO43169 146 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 SYNGR1O43759 233 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 CLDN1O95832 211 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 IGHV3-13P01766 116 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 IGHV3-7P01780 117 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 CELA3AP09093 270 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 COX6A1P12074 109 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 SELEP16581 610 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 DUSP3P51452 185 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms