RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 PHB2Q99623 299 aa7.55□□□□□ -1.2
NR1I3-209ENST00000428574 RTBDNQ9BSG5 229 aaPredicted RBP7.55□□□□□ -1.2
NR1I3-209ENST00000428574 SUCNR1Q9BXA5 334 aa7.55□□□□□ -1.2
NR1I3-209ENST00000428574 C5orf66Q9H5L9 145 aa7.55□□□□□ -1.2
NR1I3-209ENST00000428574 FAM212BQ9NTI7 297 aaPredicted RBP7.55□□□□□ -1.2
NR1I3-209ENST00000428574 ZNF69Q9UC07 566 aa7.55□□□□□ -1.2
NR1I3-209ENST00000428574 MIOXQ9UGB7 285 aa7.55□□□□□ -1.2
NR1I3-209ENST00000428574 KCNIP3Q9Y2W7 256 aa7.55□□□□□ -1.2
NR1I3-209ENST00000428574 KMT2BQ9UMN6 2715 aaPredicted RBP7.55□□□□□ -1.2
NR1I3-209ENST00000428574 DIDO1Q9BTC0 2240 aaKnown RBP7.55□□□□□ -1.2
NR1I3-209ENST00000428574 A0A1W2PPR1 153 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 C9orf170A2RU37 121 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 C15orf65H3BRN8 121 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 GPR31O00270 319 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 BET1O15155 118 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 TMPRSS2O15393 492 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 NDUFB3O43676 98 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 SSNA1O43805 119 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 SFT2D2O95562 160 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 HLA-AP01891 365 aaKnown RBP7.54□□□□□ -1.2
NR1I3-209ENST00000428574 HBZP02008 142 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 GYPAP02724 150 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 GIPP09681 153 aaPredicted RBP7.54□□□□□ -1.2
NR1I3-209ENST00000428574 COX6B1P14854 86 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 PAX1P15863 534 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 AADACP22760 399 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 IL2RGP31785 369 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 GLIPR1P48060 266 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 LUMP51884 338 aaPredicted RBP7.54□□□□□ -1.2
NR1I3-209ENST00000428574 CBX3Q13185 183 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 ABCA11PQ4W5N1 156 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 NLRC3Q7RTR2 1065 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 TMED4Q7Z7H5 227 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 SGPP2Q8IWX5 399 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 ZCCHC24Q8N2G6 241 aaKnown RBP7.54□□□□□ -1.2
NR1I3-209ENST00000428574 C12orf45Q8N5I9 185 aaPredicted RBP7.54□□□□□ -1.2
NR1I3-209ENST00000428574 TCTEX1D1Q8N7M0 179 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 LRTM2Q8N967 370 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 C8orf31Q8N9H6 132 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 ZNRF1Q8ND25 227 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 BVESQ8NE79 360 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 OR5T2Q8NGG2 359 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 COQ8AQ8NI60 647 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 DACT3Q96B18 629 aaPredicted RBP7.54□□□□□ -1.2
NR1I3-209ENST00000428574 TMEM246Q9BRR3 403 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 GAL3ST2Q9H3Q3 398 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 PLEKHF2Q9H8W4 249 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 BARX1Q9HBU1 254 aaPredicted RBP7.54□□□□□ -1.2
NR1I3-209ENST00000428574 SLC2A9Q9NRM0 540 aa7.54□□□□□ -1.2
NR1I3-209ENST00000428574 SLC25A10Q9UBX3 287 aaPredicted RBP7.54□□□□□ -1.2
NR1I3-209ENST00000428574 UBR5O95071 2799 aaPredicted RBP7.53□□□□□ -1.2
NR1I3-209ENST00000428574 IGHV3OR15-7A0A075B7D8 119 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 KBTBD11-OT1A0A1B0GTJ5 212 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 DUXBA0A1W2PPF3 345 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 A0A1W2PPH5 198 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 DBX1A6NMT0 343 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 RNF212BA8MTL3 300 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 HSPA12AO43301 675 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 ADAM20O43506 726 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 YPEL1O60688 119 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 OR2A4O95047 310 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 IFNA2P01563 188 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 DAOP14920 347 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 RPS2P15880 293 aaKnown RBP7.53□□□□□ -1.2
NR1I3-209ENST00000428574 RAB7AP51149 207 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 RAP2BP61225 183 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 SRSF4Q08170 494 aaKnown RBP7.53□□□□□ -1.2
NR1I3-209ENST00000428574 PPP1R1AQ13522 171 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 FAM201AQ5SY85 155 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 LIN54Q6MZP7 749 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.53□□□□□ -1.2
NR1I3-209ENST00000428574 OR2AK2Q8NG84 335 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 OR10V1Q8NGI7 309 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 OR13A1Q8NGR1 328 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 C8orf46Q8TAG6 207 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 RTN4IP1Q8WWV3 396 aaPredicted RBP7.53□□□□□ -1.2
NR1I3-209ENST00000428574 IL22RA2Q969J5 263 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 ARL11Q969Q4 196 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 TMEM230Q96A57 120 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 CYYR1Q96J86 154 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 ST6GAL2Q96JF0 529 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 YPEL2Q96QA6 119 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 OR2A7Q96R45 310 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 CCL13Q99616 98 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 SEC22CQ9BRL7 303 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 LIME1Q9H400 295 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 UBTD1Q9HAC8 227 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 RAB18Q9NP72 206 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 CALYQ9NYX4 217 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 CLN8Q9UBY8 286 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 GAB2Q9UQC2 676 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 LAMP3Q9UQV4 416 aa7.53□□□□□ -1.2
NR1I3-209ENST00000428574 ZNF462Q96JM2 2506 aa7.52□□□□□ -1.21
NR1I3-209ENST00000428574 F5H0A9 414 aaPredicted RBP7.52□□□□□ -1.21
NR1I3-209ENST00000428574 J3QKU1 62 aa7.52□□□□□ -1.21
NR1I3-209ENST00000428574 NDUFS8O00217 210 aa7.52□□□□□ -1.21
NR1I3-209ENST00000428574 HNRNPCP07910 306 aaKnown RBP eCLIP7.52□□□□□ -1.21
NR1I3-209ENST00000428574 AKR1C4P17516 323 aa7.52□□□□□ -1.21
NR1I3-209ENST00000428574 NFYAP23511 347 aaPredicted RBP7.52□□□□□ -1.21
NR1I3-209ENST00000428574 VAMP1P23763 118 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms