RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 CST9LQ9H4G1 147 aa13.82□□□□□ -0.2
C9orf3-206ENST00000428313 TAAR3PQ9P1P4 343 aa13.82□□□□□ -0.2
C9orf3-206ENST00000428313 POLR1DQ9Y2S0 133 aa13.82□□□□□ -0.2
C9orf3-206ENST00000428313 TIMM9Q9Y5J7 89 aa13.82□□□□□ -0.2
C9orf3-206ENST00000428313 HCFC2Q9Y5Z7 792 aa13.82□□□□□ -0.2
C9orf3-206ENST00000428313 LTBP2Q14767 1821 aa13.82□□□□□ -0.2
C9orf3-206ENST00000428313 TRAV9-1A0A075B6T8 112 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 CCDC163A0A0D9SF12 145 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 A0A1W2PNV4 684 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 FRG2CA6NGY1 282 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 TMPRSS2O15393 492 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 GPM6BQ13491 265 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 VHLLQ6RSH7 139 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 TMPRSS7Q7RTY8 843 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 DEFB128Q7Z7B8 93 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 ZNF295-AS1Q8N0V1 137 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 SIGLECL1Q8N7X8 197 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 ZNF721Q8TF20 911 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 SMIM12Q96EX1 92 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 CHODLQ9H9P2 273 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 MRPL27Q9P0M9 148 aaKnown RBP13.81□□□□□ -0.2
C9orf3-206ENST00000428313 RPH3ALQ9UNE2 315 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 IGHV1-69-2A0A0G2JMI3 117 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 A0A0J9YY10 115 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 SLC25A6P12236 298 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 POU3F1Q03052 451 aaPredicted RBP13.81□□□□□ -0.2
C9orf3-206ENST00000428313 TMEM267Q0VDI3 215 aaPredicted RBP13.81□□□□□ -0.2
C9orf3-206ENST00000428313 H1FNTQ75WM6 255 aaPredicted RBP13.81□□□□□ -0.2
C9orf3-206ENST00000428313 WDR5BQ86VZ2 330 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 PNKDQ8N490 385 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 TCTEX1D1Q8N7M0 179 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 FGF22Q9HCT0 170 aa13.81□□□□□ -0.2
C9orf3-206ENST00000428313 ALG1L2C9J202 215 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 IL11P20809 199 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 ANOS1P23352 680 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 TSPOP30536 169 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 GNRHRP30968 328 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 EFNA3P52797 238 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 GRB2P62993 217 aaKnown RBP13.8□□□□□ -0.2
C9orf3-206ENST00000428313 MCEMP1Q8IX19 187 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 ZNF160Q9HCG1 818 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 MED29Q9NX70 200 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 CTXND1A0A1B0GTU2 59 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 PRSS47A8MTI9 375 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 TESK1Q15569 626 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 FFAR4Q5NUL3 377 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 OR5P3Q8WZ94 311 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 PSMF1Q92530 271 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 C10orf35Q96D05 121 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 LIN37Q96GY3 246 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-206ENST00000428313 LOXL4Q96JB6 756 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 WDR61Q9GZS3 305 aaKnown RBP13.8□□□□□ -0.2
C9orf3-206ENST00000428313 PNRC2Q9NPJ4 139 aaKnown RBP13.8□□□□□ -0.2
C9orf3-206ENST00000428313 PLA2G3Q9NZ20 509 aa13.8□□□□□ -0.2
C9orf3-206ENST00000428313 IGHV2-26A0A0B4J1V2 119 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 PIGBOS1A0A0B4J2F0 54 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 PRSS38A1L453 326 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 GPX1P07203 203 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 HBG1P69891 147 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 HBG2P69892 147 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 LDLRAD2Q5SZI1 272 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 TCF23Q7RTU1 214 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 BAGE3Q86Y29 109 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 BAGE2Q86Y30 109 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 RPP25LQ8N5L8 163 aaKnown RBP13.79□□□□□ -0.2
C9orf3-206ENST00000428313 OR5D13Q8NGL4 314 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 GMPPAQ96IJ6 420 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-206ENST00000428313 LYZL4Q96KX0 146 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 OR5B21A6NL26 309 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 DHRS3O75911 302 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 HINT1P49773 126 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-206ENST00000428313 KRTDAPP60985 99 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 PRTGQ2VWP7 1150 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 DMRTC1Q5HYR2 192 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 Q6ZSR3 168 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 Q6ZVH6 145 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 C12orf76Q8N812 135 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-206ENST00000428313 SGMS2Q8NHU3 365 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 BMFQ96LC9 184 aa13.79□□□□□ -0.2
C9orf3-206ENST00000428313 RBM24Q9BX46 236 aaKnown RBP13.79□□□□□ -0.2
C9orf3-206ENST00000428313 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.78□□□□□ -0.2
C9orf3-206ENST00000428313 TNFSF12O43508 249 aa13.78□□□□□ -0.2
C9orf3-206ENST00000428313 ZNF253O75346 499 aa13.78□□□□□ -0.2
C9orf3-206ENST00000428313 REG1AP05451 166 aa13.78□□□□□ -0.2
C9orf3-206ENST00000428313 CTSSP25774 331 aa13.78□□□□□ -0.2
C9orf3-206ENST00000428313 ASCL4Q6XD76 172 aa13.78□□□□□ -0.2
C9orf3-206ENST00000428313 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.78□□□□□ -0.2
C9orf3-206ENST00000428313 OR2M7Q8NG81 312 aa13.78□□□□□ -0.2
C9orf3-206ENST00000428313 PIGTQ969N2 578 aa13.78□□□□□ -0.2
C9orf3-206ENST00000428313 DEC1Q9P2X7 70 aa13.78□□□□□ -0.2
C9orf3-206ENST00000428313 SHANK1Q9Y566 2161 aa13.78□□□□□ -0.2
C9orf3-206ENST00000428313 SAA2-SAA4A0A096LPE2 208 aa13.78□□□□□ -0.2
C9orf3-206ENST00000428313 C17orf51A8MQB3 221 aa13.78□□□□□ -0.2
C9orf3-206ENST00000428313 KIAA1324LA8MWY0 1029 aaPredicted RBP13.78□□□□□ -0.2
C9orf3-206ENST00000428313 C17orf105B2RV13 164 aa13.78□□□□□ -0.2
C9orf3-206ENST00000428313 H3BP45 60 aa13.78□□□□□ -0.2
C9orf3-206ENST00000428313 GALR2O43603 387 aaPredicted RBP13.78□□□□□ -0.2
C9orf3-206ENST00000428313 IL12BP29460 328 aa13.78□□□□□ -0.2
C9orf3-206ENST00000428313 BIDP55957 195 aa13.78□□□□□ -0.2
C9orf3-206ENST00000428313 NAT6Q93015 286 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms