RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 IGHV3-43A0A0B4J1X8 118 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 B9A039 149 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 M0QZ24 198 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 RAMP1O60894 148 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 OR2A4O95047 310 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 IGHV3-43DP0DP04 118 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 CD40P25942 277 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 GSK3AP49840 483 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 CATSPERDQ86XM0 798 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 Q8IYB0 196 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 ZDHHC22Q8N966 263 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 ADPRHL1Q8NDY3 354 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 OR2G3Q8NGZ4 309 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 SDSLQ96GA7 329 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 OR2A7Q96R45 310 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 LPAR3Q9UBY5 353 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 TUBD1Q9UJT1 453 aa9.21□□□□□ -0.94
TCOF1-204ENST00000427724 LMX1BO60663 402 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 TBPP20226 339 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 SP6Q3SY56 376 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 DEGS2Q6QHC5 323 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 DTX1Q86Y01 620 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 C17orf78Q8N4C9 275 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 NECAP1Q8NC96 275 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 OR5AP2Q8NGF4 316 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 C2orf50Q96LR7 162 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 CCL13Q99616 98 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 GPR27Q9NS67 375 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 OR5B21A6NL26 309 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 SOCS1O15524 211 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 ZNF708P17019 499 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 GABRA4P48169 554 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 ZNF133P52736 654 aaPredicted RBP9.2□□□□□ -0.94
TCOF1-204ENST00000427724 PRRX1P54821 245 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 ARF6P62330 175 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 PRAMEF5Q5TYX0 476 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 STUMQ69YW2 141 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 ADAD2Q8NCV1 583 aaKnown RBP9.2□□□□□ -0.94
TCOF1-204ENST00000427724 REG4Q9BYZ8 158 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 NECAP2Q9NVZ3 263 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 TAAR5O14804 337 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 FREM3P0C091 2139 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 GFRA1P56159 465 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 FOXF2Q12947 444 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 RIPPLY2Q5TAB7 128 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 FAM27BQ5VT28 67 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 MRGPRDQ8TDS7 321 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 EDARADDQ8WWZ3 215 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 SPSB1Q96BD6 273 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 GALMQ96C23 342 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 GPX7Q96SL4 187 aaPredicted RBP9.2□□□□□ -0.94
TCOF1-204ENST00000427724 NMNAT2Q9BZQ4 307 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 GAL3ST2Q9H3Q3 398 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 TANC1Q9C0D5 1861 aa9.2□□□□□ -0.94
TCOF1-204ENST00000427724 TMEM30CPA0ZSE6 113 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 PRR32B1ATL7 298 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 DUS4LO95620 317 aaKnown RBP9.19□□□□□ -0.94
TCOF1-204ENST00000427724 HIST1H1DP16402 221 aaKnown RBP9.19□□□□□ -0.94
TCOF1-204ENST00000427724 SULT1A1P50225 295 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 RPL31P62899 125 aaKnown RBP9.19□□□□□ -0.94
TCOF1-204ENST00000427724 ADIRFQ15847 76 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 ARRDC1Q8N5I2 433 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 TEX29Q8N6K0 151 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 OR8B12Q8NGG6 310 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 OR5D13Q8NGL4 314 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 OR8U1Q8NH10 309 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 MALSU1Q96EH3 234 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 SPRR3Q9UBC9 169 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 VSIG4Q9Y279 399 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 LYPD3O95274 346 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 IFNA1P01562 189 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 H2AFB1P0C5Y9 115 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 TDGF1P13385 188 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 UQCRFS1P47985 274 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 EGR4Q05215 589 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 RTL8BQ17RB0 113 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 ADAT3Q96EY9 351 aaPredicted RBP9.19□□□□□ -0.94
TCOF1-204ENST00000427724 COMMD5Q9GZQ3 224 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 VSIG8P0DPA2 414 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 PAX6P26367 422 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 MST1P26927 711 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 CA7P43166 264 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 C6orf201Q7Z4U5 140 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 ZCCHC24Q8N2G6 241 aaKnown RBP9.19□□□□□ -0.94
TCOF1-204ENST00000427724 PINX1Q96BK5 328 aaKnown RBP9.19□□□□□ -0.94
TCOF1-204ENST00000427724 GYPAP02724 150 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 ETV3LQ6ZN32 361 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 ZNF826PQ6ZT77 177 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 Q71RC1 249 aaPredicted RBP9.19□□□□□ -0.94
TCOF1-204ENST00000427724 SLC26A10Q8NG04 563 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 OR13C8Q8NGS7 320 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 ZNF426Q9BUY5 554 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 ZNF665Q9H7R5 613 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 PLEKHA3Q9HB20 300 aa9.19□□□□□ -0.94
TCOF1-204ENST00000427724 ABCA12Q86UK0 2595 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 DFFBO76075 338 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 HOXB1P14653 301 aaPredicted RBP9.18□□□□□ -0.94
TCOF1-204ENST00000427724 WT1P19544 449 aaPredicted RBP9.18□□□□□ -0.94
TCOF1-204ENST00000427724 RNF151Q2KHN1 245 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 GGNBP1Q5YKI7 109 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms