RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 PSG9Q00887 426 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 SPATA45Q537H7 98 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 NCMAPQ5T1S8 102 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 LINC00052Q96N35 136 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 LOC107984156A0A0G2JMH3 177 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 HYPMO75409 117 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 CD1AP06126 327 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 HERPUD1Q15011 391 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 ACER2Q5QJU3 275 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 OVCH2Q7RTZ1 564 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 ARL17AQ8IVW1 177 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 TMEM189A5PLL7 270 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 ARG1P05089 322 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 CCL7P80098 99 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 ZXDAP98168 799 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 TCF24Q7RTU0 167 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 RND1Q92730 232 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 NPVFQ9HCQ7 196 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 HPRT1P00492 218 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 COX7A1P24310 79 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 SLC35B1P78383 322 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 SGMS2Q8NHU3 365 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 GUCD1Q96NT3 240 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 METTL12A8MUP2 240 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 AMY1AP04745 511 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 FMODQ06828 376 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 SH2D5Q6ZV89 423 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 LINC01465Q8N7H1 131 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 RNF7Q9UBF6 113 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 FOLR2P14207 255 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 OR10AG1Q8NH19 301 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 NUDT8Q8WV74 236 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 MPLP40238 635 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 LSM10Q969L4 123 aaKnown RBP12.69□□□□□ -0.38
PTPN13-203ENST00000427191 BCORQ6W2J9 1755 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 HSPB1P04792 205 aaKnown RBP12.69□□□□□ -0.38
PTPN13-203ENST00000427191 GAPTQ8N292 157 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 TMEM45BQ96B21 275 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 ARRDC1-AS1Q9H2J1 176 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 IL17BQ9UHF5 180 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 SFTPCP11686 197 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 CDX1P47902 265 aaPredicted RBP12.69□□□□□ -0.38
PTPN13-203ENST00000427191 TCL1AP56279 114 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 TCTN1Q2MV58 587 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 C10orf126Q8N4M7 172 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 MS4A5Q9H3V2 200 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 OR51B2Q9Y5P1 312 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 MC5RP33032 325 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 CKS2P33552 79 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 ASB1Q9Y576 335 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 PDCD11Q14690 1871 aaKnown RBP12.69□□□□□ -0.38
PTPN13-203ENST00000427191 J3QT63 122 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 SLC23A3Q6PIS1 610 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 SLC25A34Q6PIV7 304 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 LRRC75AQ8NAA5 344 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 C21orf140B9A014 251 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 ATP5IP56385 69 aaPredicted RBP12.69□□□□□ -0.38
PTPN13-203ENST00000427191 FAM109BQ6ICB4 259 aaPredicted RBP12.69□□□□□ -0.38
PTPN13-203ENST00000427191 ZNF519Q8TB69 540 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 RCC2Q9P258 522 aaKnown RBP12.69□□□□□ -0.38
PTPN13-203ENST00000427191 MMP16P51512 607 aa12.69□□□□□ -0.38
PTPN13-203ENST00000427191 WIPI1Q5MNZ9 446 aaPredicted RBP12.69□□□□□ -0.38
PTPN13-203ENST00000427191 INO80CQ6PI98 192 aaPredicted RBP12.69□□□□□ -0.38
PTPN13-203ENST00000427191 DLEC1Q9Y238 1755 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 NRXN3Q9Y4C0 1643 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 MFAP2P55001 183 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 WDR25Q64LD2 544 aaPredicted RBP12.68□□□□□ -0.38
PTPN13-203ENST00000427191 PQLC2Q6ZP29 291 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 OR4A5Q8NH83 315 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 RFESDQ8TAC1 157 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 AHDC1Q5TGY3 1603 aaPredicted RBP12.68□□□□□ -0.38
PTPN13-203ENST00000427191 H0Y980 276 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 K7N7A8 449 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 PAGE4O60829 102 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 TSPAN13O95857 204 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 ROM1Q03395 351 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 RTP5Q14D33 572 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 FAM222BQ8WU58 562 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 PATE1Q8WXA2 126 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 ST6GAL2Q96JF0 529 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 WSB2Q9NYS7 404 aaPredicted RBP12.68□□□□□ -0.38
PTPN13-203ENST00000427191 KBTBD11O94819 623 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 TMEM50BP56557 158 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 ALKBH7Q9BT30 221 aaPredicted RBP12.68□□□□□ -0.38
PTPN13-203ENST00000427191 ZNF841Q6ZN19 808 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 HLA-DRB1P01911 266 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 HEATR1Q9H583 2144 aaKnown RBP12.68□□□□□ -0.38
PTPN13-203ENST00000427191 CD74P04233 296 aa12.68□□□□□ -0.38
PTPN13-203ENST00000427191 FAM90A26D6RGX4 464 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 J3QR06 171 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 DAOP14920 347 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 TSPOP30536 169 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 ERVFRD-1P60508 538 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 MEF2BQ02080 365 aaPredicted RBP12.67□□□□□ -0.38
PTPN13-203ENST00000427191 SSMEM1Q8WWF3 244 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 NRIP2Q9BQI9 281 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 TMEM140Q9NV12 185 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 OR2A4O95047 310 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 CTLA4P16410 223 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 RAE1P78406 368 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms