RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 FOXO1Q12778 655 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 ELOBQ15370 118 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 CLEC12BQ2HXU8 276 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 MRPL30Q8TCC3 161 aaKnown RBP12.25□□□□□ -0.45
ERCC3-202ENST00000426778 TCTEX1D2Q8WW35 142 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 SPIN2AQ99865 258 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 SPIN2BQ9BPZ2 258 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 TUBA4BQ9H853 241 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 TRAV24A0A0B4J272 114 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 NTN3O00634 580 aaPredicted RBP12.24□□□□□ -0.45
ERCC3-202ENST00000426778 WDR1O75083 606 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 SLC34A2O95436 690 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 TRGC2P03986 189 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 UCP1P25874 307 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 BEND4Q6ZU67 534 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 LFNGQ8NES3 379 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 SSX3Q99909 188 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 DOK5Q9P104 306 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 RNF115Q9Y4L5 304 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 IFNA17P01571 189 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 F2RP25116 425 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 CEBPDP49716 269 aaPredicted RBP12.24□□□□□ -0.45
ERCC3-202ENST00000426778 CEACAM21Q3KPI0 293 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 CLDND2Q8NHS1 167 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 SPSB4Q96A44 273 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 PRDM14Q9GZV8 571 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 TMPRSS5Q9H3S3 457 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 PLSCR2Q9NRY7 297 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 RPRMQ9NS64 109 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 ATP23Q9Y6H3 246 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 CD300LBA8K4G0 201 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 RIPPLY2Q5TAB7 128 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 NUFIP2Q7Z417 695 aaKnown RBP12.24□□□□□ -0.45
ERCC3-202ENST00000426778 OR10J5Q8NHC4 309 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 YPEL4Q96NS1 127 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 HIST1H2AAQ96QV6 131 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 GGACTQ9BVM4 153 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 KIAA1456Q9P272 454 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 RNF150Q9ULK6 438 aa12.24□□□□□ -0.45
ERCC3-202ENST00000426778 CACNA1GO43497 2377 aa12.23□□□□□ -0.45
ERCC3-202ENST00000426778 IGKV1-39P01597 117 aa12.23□□□□□ -0.45
ERCC3-202ENST00000426778 IGKV1D-39P04432 117 aa12.23□□□□□ -0.45
ERCC3-202ENST00000426778 DEFA4P12838 97 aa12.23□□□□□ -0.45
ERCC3-202ENST00000426778 MMP9P14780 707 aa12.23□□□□□ -0.45
ERCC3-202ENST00000426778 NIPSNAP3BQ9BS92 247 aa12.23□□□□□ -0.45
ERCC3-202ENST00000426778 PRSS50Q9UI38 385 aa12.23□□□□□ -0.45
ERCC3-202ENST00000426778 CADP27708 2225 aa12.23□□□□□ -0.45
ERCC3-202ENST00000426778 TUSC2O75896 110 aa12.23□□□□□ -0.45
ERCC3-202ENST00000426778 LY86O95711 162 aa12.23□□□□□ -0.45
ERCC3-202ENST00000426778 SRPXP78539 464 aa12.23□□□□□ -0.45
ERCC3-202ENST00000426778 S100A12P80511 92 aa12.23□□□□□ -0.45
ERCC3-202ENST00000426778 PYY3Q5JQD4 70 aa12.23□□□□□ -0.45
ERCC3-202ENST00000426778 COLCA1Q6ZS62 124 aa12.23□□□□□ -0.45
ERCC3-202ENST00000426778 ATP5SQ99766 215 aa12.23□□□□□ -0.45
ERCC3-202ENST00000426778 ZNF391Q9UJN7 358 aa12.23□□□□□ -0.45
ERCC3-202ENST00000426778 EP300Q09472 2414 aaPredicted RBP12.22□□□□□ -0.45
ERCC3-202ENST00000426778 DNPH1O43598 174 aa12.22□□□□□ -0.45
ERCC3-202ENST00000426778 WNT5AP41221 380 aa12.22□□□□□ -0.45
ERCC3-202ENST00000426778 ERVS71-1P61550 626 aa12.22□□□□□ -0.45
ERCC3-202ENST00000426778 SPANXN5Q5MJ07 72 aa12.22□□□□□ -0.45
ERCC3-202ENST00000426778 OR8G2PQ6IF36 304 aa12.22□□□□□ -0.45
ERCC3-202ENST00000426778 ZNF880Q6PDB4 577 aa12.22□□□□□ -0.45
ERCC3-202ENST00000426778 STX12Q86Y82 276 aa12.22□□□□□ -0.45
ERCC3-202ENST00000426778 GPR61Q9BZJ8 451 aa12.22□□□□□ -0.45
ERCC3-202ENST00000426778 LHX2P50458 406 aa12.22□□□□□ -0.45
ERCC3-202ENST00000426778 ZNF726P1Q15940 193 aa12.22□□□□□ -0.45
ERCC3-202ENST00000426778 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.22□□□□□ -0.45
ERCC3-202ENST00000426778 FAM185AQ8N0U4 392 aa12.22□□□□□ -0.45
ERCC3-202ENST00000426778 TOLLIPQ9H0E2 274 aa12.22□□□□□ -0.45
ERCC3-202ENST00000426778 PLK3Q9H4B4 646 aa12.22□□□□□ -0.45
ERCC3-202ENST00000426778 NEURL1O76050 574 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 LINC00205P59089 165 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 ALKBH6Q3KRA9 238 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 SPINK9Q5DT21 86 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 DCAF12Q5T6F0 453 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 ZNF324BQ6AW86 544 aaPredicted RBP12.21□□□□□ -0.45
ERCC3-202ENST00000426778 CXorf67Q86X51 503 aaPredicted RBP12.21□□□□□ -0.45
ERCC3-202ENST00000426778 NECAP1Q8NC96 275 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 TVP23CQ96ET8 276 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 DLL3Q9NYJ7 618 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 OR2W1Q9Y3N9 320 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 LOXL2Q9Y4K0 774 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 CNOT1A5YKK6 2376 aaKnown RBP12.21□□□□□ -0.45
ERCC3-202ENST00000426778 KIR2DS1A0A191URI9 304 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 HIST1H2BKO60814 126 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 HIST1H2BJP06899 126 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 BMP5P22003 454 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 HIST1H2BOP23527 126 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 HIST1H2BBP33778 126 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 KIR2DS4P43632 304 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 HIST1H2BDP58876 126 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 TAS2R30P59541 319 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 HIST1H2BCP62807 126 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 KIR2DS1Q14954 304 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 HIST2H2BEQ16778 126 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.21□□□□□ -0.45
ERCC3-202ENST00000426778 OR2M7Q8NG81 312 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 OR10D4PQ8NGN7 298 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 HIST1H2BHQ93079 126 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 HIST1H2BNQ99877 126 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms