RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 C15orf65H3BRN8 121 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 LDLRAD4O15165 306 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 HTR1DP28221 377 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 RPS19P39019 145 aaKnown RBP10.21□□□□□ -0.77
GPC1-204ENST00000426280 DYNLT3P51808 116 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 RPS27AP62979 156 aaKnown RBP10.21□□□□□ -0.77
GPC1-204ENST00000426280 TMEM95Q3KNT9 176 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 GPR141Q7Z602 305 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 TPRA1Q86W33 373 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 LYG1Q8N1E2 194 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 KCNG3Q8TAE7 436 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 LPAR5Q9H1C0 372 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 GAL3ST2Q9H3Q3 398 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 IFT22Q9H7X7 185 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 LINC00574Q9H8X3 128 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 LIN7BQ9HAP6 207 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 IDI2-AS1Q9NZ38 188 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 DPM3Q9P2X0 92 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 DAPK2Q9UIK4 370 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 PEX16Q9Y5Y5 336 aa10.21□□□□□ -0.77
GPC1-204ENST00000426280 BUB1B-PAK6H3BSN5 160 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 AIPO00170 330 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 SOCS1O15524 211 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 WIPF1O43516 503 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 MT-ND4P03905 459 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 AMY1AP04745 511 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 AMY2AP04746 511 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 SNRPBP14678 240 aaKnown RBP10.2□□□□□ -0.78
GPC1-204ENST00000426280 SERPINB10P48595 397 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 PAX5Q02548 391 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 HLA-DRB5Q30154 266 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 NKAPLQ5M9Q1 402 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 TPTE2P1Q5T6R2 138 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 OR52W1Q6IF63 320 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 RAB12Q6IQ22 244 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 SFXN4Q6P4A7 337 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 OR2W3Q7Z3T1 314 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 LINC00596Q86U02 117 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 ANKRD13BQ86YJ7 626 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 Q8N2B8 174 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 CMYA5Q8N3K9 4069 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 KLHDC1Q8N7A1 406 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 NEK7Q8TDX7 302 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 WIPF2Q8TF74 440 aaPredicted RBP10.2□□□□□ -0.78
GPC1-204ENST00000426280 TM2D1Q9BX74 207 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 BARHL1Q9BZE3 327 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 NCOR1P1Q9H4R4 102 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 OR6C3Q9NZP0 311 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 RCC2Q9P258 522 aaKnown RBP10.2□□□□□ -0.78
GPC1-204ENST00000426280 PSG11Q9UQ72 335 aa10.2□□□□□ -0.78
GPC1-204ENST00000426280 IGHV3-43A0A0B4J1X8 118 aa10.19□□□□□ -0.78
GPC1-204ENST00000426280 UBE2QL1A1L167 161 aa10.19□□□□□ -0.78
GPC1-204ENST00000426280 J3QR06 171 aa10.19□□□□□ -0.78
GPC1-204ENST00000426280 GABARAPO95166 117 aa10.19□□□□□ -0.78
GPC1-204ENST00000426280 IL1AP01583 271 aa10.19□□□□□ -0.78
GPC1-204ENST00000426280 IGHV3-43DP0DP04 118 aa10.19□□□□□ -0.78
GPC1-204ENST00000426280 VSIG10L2P0DP72 767 aa10.19□□□□□ -0.78
GPC1-204ENST00000426280 VEGFCP49767 419 aa10.19□□□□□ -0.78
GPC1-204ENST00000426280 GNG10P50151 68 aa10.19□□□□□ -0.78
GPC1-204ENST00000426280 RBM39Q14498 530 aaKnown RBP10.19□□□□□ -0.78
GPC1-204ENST00000426280 CTF1Q16619 201 aa10.19□□□□□ -0.78
GPC1-204ENST00000426280 IDNKQ5T6J7 187 aa10.19□□□□□ -0.78
GPC1-204ENST00000426280 CLVS1Q8IUQ0 354 aaPredicted RBP10.19□□□□□ -0.78
GPC1-204ENST00000426280 OR4C13Q8NGP0 309 aa10.19□□□□□ -0.78
GPC1-204ENST00000426280 OR5H6Q8NGV6 325 aa10.19□□□□□ -0.78
GPC1-204ENST00000426280 CFHR4Q92496 578 aa10.19□□□□□ -0.78
GPC1-204ENST00000426280 OCSTAMPQ9BR26 566 aa10.19□□□□□ -0.78
GPC1-204ENST00000426280 ABCB10Q9NRK6 738 aa10.19□□□□□ -0.78
GPC1-204ENST00000426280 FAM90A10PA6NDY2 464 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 FAM90A18PA6NE21 464 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 FAM90A16PA6NEW6 464 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 FAM90A20PA6NIJ5 464 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 FAM90A7PA6NKC0 464 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 FAM90A12PA8MX19 464 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 FAM90A5PA8MXJ8 464 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 FAM90A23PA8MXZ1 464 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 LEUTXA8MZ59 168 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 MCRIP1C9JLW8 97 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 F2RL2O00254 374 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 PDCD6O75340 191 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 FAM90A15PP0C7V4 464 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 FAM90A13PP0C7W8 464 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 FAM90A14PP0C7W9 464 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 FAM90A24PP0C7X0 464 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 CD28P10747 220 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 FUT3P21217 361 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 CHATP28329 748 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 BLVRBP30043 206 aaPredicted RBP10.18□□□□□ -0.78
GPC1-204ENST00000426280 RPL5P46777 297 aaKnown RBP10.18□□□□□ -0.78
GPC1-204ENST00000426280 TMEM50BP56557 158 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 LOXL3P58215 753 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 MOGAT2Q3SYC2 334 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 ZNF497Q6ZNH5 498 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 Q6ZPA2 131 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 C6orf201Q7Z4U5 140 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 ZNF565Q8N9K5 539 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 OR4K15Q8NH41 348 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 OR9G1Q8NH87 305 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 ZNF596Q8TC21 504 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 LGALS14Q8TCE9 139 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms