RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 TMEM187Q14656 261 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 ADIPOQQ15848 244 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 ANKRD55Q3KP44 614 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 TMEM30BQ3MIR4 351 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 PHLDA2Q53GA4 152 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 KRBOX4Q5JUW0 171 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 ACOT7LQ6ZUV0 252 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 TMUB2Q71RG4 321 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 ZNF561Q8N587 486 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 IL1F10Q8WWZ1 152 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 IL22RA2Q969J5 263 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 WDR89Q96FK6 387 aaPredicted RBP7.95□□□□□ -1.14
HMGB4-201ENST00000425537 SEC22AQ96IW7 307 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 FAM234AQ9H0X4 552 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 TAF9BQ9HBM6 251 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 DYNLRB1Q9NP97 96 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 OR6C3Q9NZP0 311 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 UBQLN2Q9UHD9 624 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 KIF25Q9UIL4 384 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 PPP1R3CQ9UQK1 317 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 MAB21L2Q9Y586 359 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 CFAP46Q8IYW2 2715 aa7.95□□□□□ -1.14
HMGB4-201ENST00000425537 KALRNO60229 2985 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 A0A1B0GW55 424 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 KANTRA0A1W2PQU2 76 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 TUBAL3A6NHL2 446 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 FAM90A27PA6NNH2 459 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 B9A039 149 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 H0Y980 276 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 J3QKU1 62 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 ATG12O94817 140 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 LHBP01229 141 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 HOXB5P09067 269 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 OR5AC1P0C628 307 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 DUX4L2P0CJ85 424 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 DUX4L3P0CJ86 424 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 DUX4L4P0CJ87 422 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 DUX4L5P0CJ88 424 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 DUX4L6P0CJ89 424 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 DUX4L7P0CJ90 424 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 RNF224P0DH78 156 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 PSG2P11465 335 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 GNRHRP30968 328 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 OR3A1P47881 315 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 EIF5AP63241 154 aaKnown RBP7.94□□□□□ -1.14
HMGB4-201ENST00000425537 HERPUD1Q15011 391 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 MSMPQ1L6U9 139 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 IAH1Q2TAA2 248 aaPredicted RBP7.94□□□□□ -1.14
HMGB4-201ENST00000425537 PRSS54Q6PEW0 395 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 TEX261Q6UWH6 196 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 Q6ZPA2 131 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 SLC51BQ86UW2 128 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 LDLRAD3Q86YD5 345 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 ZNF695Q8IW36 515 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 GCSAMQ8N6F7 178 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 TCTEX1D1Q8N7M0 179 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 BOLLQ8N9W6 283 aaKnown RBP7.94□□□□□ -1.14
HMGB4-201ENST00000425537 BVESQ8NE79 360 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 FAM222BQ8WU58 562 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 EDARADDQ8WWZ3 215 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 ABHD14BQ96IU4 210 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 ARL6Q9H0F7 186 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 TMEM222Q9H0R3 208 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 LIME1Q9H400 295 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 ZNF665Q9H7R5 613 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 DUX4Q9UBX2 424 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 TNFSF18Q9UNG2 199 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 RNF115Q9Y4L5 304 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 U3KQ87 197 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 ZNF462Q96JM2 2506 aa7.94□□□□□ -1.14
HMGB4-201ENST00000425537 TRAV38-1A0A0B4J264 116 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 IGKV1-6A0A0C4DH72 117 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.93□□□□□ -1.14
HMGB4-201ENST00000425537 K7N7A8 449 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 PSPNO60542 156 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 ATP6V1G1O75348 118 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 ADAP1O75689 374 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 CDS2O95674 445 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 HEXAP06865 529 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 SERPINE2P07093 398 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 CXCL2P19875 107 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 S100A1P23297 94 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 CEACAM6P40199 344 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 AP2S1P53680 142 aaPredicted RBP7.93□□□□□ -1.14
HMGB4-201ENST00000425537 UBA52P62987 128 aaKnown RBP7.93□□□□□ -1.14
HMGB4-201ENST00000425537 HTD2P86397 168 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 AESQ08117 197 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 EFNB3Q15768 340 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 Q5BKY6 102 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 GGNBP1Q5YKI7 109 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 THOC7Q6I9Y2 204 aaKnown RBP7.93□□□□□ -1.14
HMGB4-201ENST00000425537 C20orf204Q6ZNR8 217 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 TBC1D26Q86UD7 250 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 ZNF808Q8N4W9 903 aaPredicted RBP7.93□□□□□ -1.14
HMGB4-201ENST00000425537 KCNRGQ8N5I3 272 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 CD177Q8N6Q3 437 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 GALNT11Q8NCW6 608 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 ZNF680Q8NEM1 530 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 DCUN1D4Q92564 292 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 PLPPR2Q96GM1 343 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms