RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 HSF4Q9ULV5 492 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 NEURL1O76050 574 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 DANCRP0C864 163 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 CHATP28329 748 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 PPP1CCP36873 323 aaKnown RBP11.15□□□□□ -0.62
COL12A1-205ENST00000425443 CAMLGP49069 296 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 HERV-K104P61576 105 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 GUK1Q16774 197 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 ZNF100Q8IYN0 542 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 IL22RA1Q8N6P7 574 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 C18orf12Q96KH6 178 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 FBXO7Q9Y3I1 522 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 PRR14LQ5THK1 2151 aa11.15□□□□□ -0.62
COL12A1-205ENST00000425443 IFITM10A6NMD0 228 aa11.15□□□□□ -0.63
COL12A1-205ENST00000425443 CDKN1BP46527 198 aa11.15□□□□□ -0.63
COL12A1-205ENST00000425443 DCAF10Q5QP82 559 aa11.15□□□□□ -0.63
COL12A1-205ENST00000425443 NCR3LG1Q68D85 454 aa11.15□□□□□ -0.63
COL12A1-205ENST00000425443 CD300LFQ8TDQ1 290 aa11.15□□□□□ -0.63
COL12A1-205ENST00000425443 MSI2Q96DH6 328 aaKnown RBP11.15□□□□□ -0.63
COL12A1-205ENST00000425443 PACRGQ96M98 296 aaPredicted RBP11.15□□□□□ -0.63
COL12A1-205ENST00000425443 TP53RKQ96S44 253 aa11.15□□□□□ -0.63
COL12A1-205ENST00000425443 RARRES2Q99969 163 aa11.15□□□□□ -0.63
COL12A1-205ENST00000425443 NDUFAF3Q9BU61 184 aa11.15□□□□□ -0.63
COL12A1-205ENST00000425443 ZNF703Q9H7S9 590 aaPredicted RBP11.15□□□□□ -0.63
COL12A1-205ENST00000425443 RYDENQ9NUL5 291 aaKnown RBP11.15□□□□□ -0.63
COL12A1-205ENST00000425443 A0A1W2PPE2 198 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 AADACP22760 399 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 DTYMKP23919 212 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 TMEM217Q8N7C4 229 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 C15orf54Q8N8G6 183 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 HS3ST6Q96QI5 342 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 HIST1H2AAQ96QV6 131 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 CEP250Q9BV73 2442 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 PDCD6O75340 191 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 ZNF883P0CG24 379 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 LMO1P25800 156 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 EIF5AP63241 154 aaKnown RBP11.14□□□□□ -0.63
COL12A1-205ENST00000425443 CCL20P78556 96 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 PLP2Q04941 152 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 C3AR1Q16581 482 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 FAM180AQ6UWF9 173 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 DHRS13Q6UX07 377 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 TMEM182Q6ZP80 229 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-205ENST00000425443 APH1AQ96BI3 265 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 DIRC2Q96SL1 478 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 GPR87Q9BY21 358 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 TTTY12Q9BZ98 90 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 URGCP-MRPS24S4R325 110 aa11.14□□□□□ -0.63
COL12A1-205ENST00000425443 CNOT1A5YKK6 2376 aaKnown RBP11.14□□□□□ -0.63
COL12A1-205ENST00000425443 ATXN7O15265 892 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-205ENST00000425443 FUT3P21217 361 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 GPM6AP51674 278 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 FOXG1P55316 489 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-205ENST00000425443 UCP2P55851 309 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 UBALD1Q8TB05 177 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 SYT3Q9BQG1 590 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 MED13Q9UHV7 2174 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 LOC102724200A0A096LPH7 203 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-205ENST00000425443 SERTM2A0A1B0GWG4 89 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 A8MWP6 167 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 MMP7P09237 267 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-205ENST00000425443 OR13C7P0DN81 318 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 AGAP20933 346 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 LHX2P50458 406 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 TMEM42Q69YG0 159 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 SELENOHQ8IZQ5 122 aaKnown RBP11.13□□□□□ -0.63
COL12A1-205ENST00000425443 SLC35G3Q8N808 338 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 FAM213BQ8TBF2 198 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 RAB24Q969Q5 203 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 TECTBQ96PL2 329 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 GINS3Q9BRX5 216 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 CRIM1Q9NZV1 1036 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 OR14J1Q9UGF5 321 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 GVINP1Q7Z2Y8 2422 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 E5RGE8 158 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 MT-CO3P00414 261 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 CRYABP02511 175 aaKnown RBP11.13□□□□□ -0.63
COL12A1-205ENST00000425443 RBM11P57052 281 aaKnown RBP11.13□□□□□ -0.63
COL12A1-205ENST00000425443 RAB1AP62820 205 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 OR8B8Q15620 311 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 BATFQ16520 125 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 LHFPL4Q7Z7J7 247 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 TMEM45BQ96B21 275 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 C1QTNF5Q9BXJ0 243 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 PRDM14Q9GZV8 571 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 C12orf49Q9H741 205 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 CBLN4Q9NTU7 201 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 NSG2Q9Y328 171 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 KPTNQ9Y664 436 aa11.13□□□□□ -0.63
COL12A1-205ENST00000425443 CACNA1GO43497 2377 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 FAM24AA6NFZ4 105 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 C21orf140B9A014 251 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 SP9P0CG40 484 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 P2RY1P47900 373 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 PRDX4Q13162 271 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 LIAT1Q6ZQX7 453 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 TMEM251Q8N6I4 163 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 GALNT14Q96FL9 552 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 ZNF488Q96MN9 340 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 UBE2J1Q9Y385 318 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms