RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 C10orf105Q8TEF2 133 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 CASTOR1Q8WTX7 329 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 TLNRD1Q9H1K6 362 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 TANC2Q9HCD6 1990 aa13.07□□□□□ -0.32
SHOX2-202ENST00000425436 TRDCB7Z8K6 153 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 PPIHO43447 177 aaKnown RBP13.06□□□□□ -0.32
SHOX2-202ENST00000425436 ATP6V1G1O75348 118 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 SIX6O95475 246 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 DIRAS3O95661 229 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 IFNA2P01563 188 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 TK1P04183 234 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 ZNF728P0DKX0 622 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 GLRA1P23415 457 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 MRPS11P82912 194 aaKnown RBP13.06□□□□□ -0.32
SHOX2-202ENST00000425436 PDCD1Q15116 288 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 LY6G6FQ5SQ64 297 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 TMEM65Q6PI78 240 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 GSG1LQ6UXU4 331 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 MOB1BQ7L9L4 216 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 SLC38A6Q8IZM9 456 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 POC1AQ8NBT0 407 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 TMEM230Q96A57 120 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 DPCDQ9BVM2 203 aaPredicted RBP13.06□□□□□ -0.32
SHOX2-202ENST00000425436 WDR13Q9H1Z4 485 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 CHODLQ9H9P2 273 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 TMEM106BQ9NUM4 274 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 ZNF581Q9P0T4 197 aa13.06□□□□□ -0.32
SHOX2-202ENST00000425436 A6NLC8 198 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 L7N2F9 121 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 CDIPTO14735 213 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 RHBDL1O75783 438 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 NXPH2O95156 264 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 ZNF205O95201 554 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 CYB5R3P00387 301 aaPredicted RBP13.05□□□□□ -0.32
SHOX2-202ENST00000425436 SLC25A4P12235 298 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 FCGR2CP31995 323 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 DSCR9P59020 149 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 HERV-K104P61576 105 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 AVPI1Q5T686 147 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 DCAF12L2Q5VW00 463 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 KCTD9Q7L273 389 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 C11orf53Q8IXP5 236 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 FAM185AQ8N0U4 392 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 MOB3AQ96BX8 217 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 NMES1Q9C002 83 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 BPESC1Q9GZL8 116 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 C1orf123Q9NWV4 160 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 SLC23A1Q9UHI7 598 aa13.05□□□□□ -0.32
SHOX2-202ENST00000425436 RNF223E7ERA6 249 aa13.04□□□□□ -0.32
SHOX2-202ENST00000425436 C3orf80F5H4A9 247 aa13.04□□□□□ -0.32
SHOX2-202ENST00000425436 ZNF44P15621 663 aa13.04□□□□□ -0.32
SHOX2-202ENST00000425436 GATA4P43694 442 aa13.04□□□□□ -0.32
SHOX2-202ENST00000425436 ABCA11PQ4W5N1 156 aa13.04□□□□□ -0.32
SHOX2-202ENST00000425436 FAM201AQ5SY85 155 aa13.04□□□□□ -0.32
SHOX2-202ENST00000425436 Q6P435 159 aa13.04□□□□□ -0.32
SHOX2-202ENST00000425436 CIARTQ8N365 385 aaPredicted RBP13.04□□□□□ -0.32
SHOX2-202ENST00000425436 CCDC71LQ8N9Z2 235 aa13.04□□□□□ -0.32
SHOX2-202ENST00000425436 MAPK1IP1LQ8NDC0 245 aa13.04□□□□□ -0.32
SHOX2-202ENST00000425436 DYRK2Q92630 601 aa13.04□□□□□ -0.32
SHOX2-202ENST00000425436 PIMREGQ9BSJ6 248 aa13.04□□□□□ -0.32
SHOX2-202ENST00000425436 HES4Q9HCC6 221 aa13.04□□□□□ -0.32
SHOX2-202ENST00000425436 RASL12Q9NYN1 266 aa13.04□□□□□ -0.32
SHOX2-202ENST00000425436 PCDHB10Q9UN67 800 aa13.04□□□□□ -0.32
SHOX2-202ENST00000425436 TRAV24A0A0B4J272 114 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 TEX13DA0A0J9YY54 714 aaPredicted RBP13.03□□□□□ -0.32
SHOX2-202ENST00000425436 hCG_1807616A0A1W2PRN6 198 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 CRYM-AS1A6NIL9 109 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 VWC2LB2RUY7 222 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 WNT9BO14905 357 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 PTBP3O95758 552 aaKnown RBP13.03□□□□□ -0.32
SHOX2-202ENST00000425436 KNG1P01042 644 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 IFNA7P01567 189 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 GPR6P46095 362 aaPredicted RBP13.03□□□□□ -0.32
SHOX2-202ENST00000425436 TMEM33P57088 247 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 BAMBIQ13145 260 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 ZNF880Q6PDB4 577 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 BATF2Q8N1L9 274 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 BOLLQ8N9W6 283 aaKnown RBP13.03□□□□□ -0.32
SHOX2-202ENST00000425436 OR4A4PQ8NGN8 299 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 ZNF488Q96MN9 340 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 NARFLQ9H6Q4 476 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 PIGBOS1A0A0B4J2F0 54 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 A0A0D9SG52 128 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 C5orf51A6NDU8 294 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 TMEM178BH3BS89 294 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 NDUFS8O00217 210 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 TSC22D2O75157 780 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 RPS2P15880 293 aaKnown RBP13.03□□□□□ -0.32
SHOX2-202ENST00000425436 RPA2P15927 270 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 LMO1P25800 156 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 DUSP1P28562 367 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 KCNJ3P48549 501 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 SUPT4H1P63272 117 aaKnown RBP13.03□□□□□ -0.32
SHOX2-202ENST00000425436 PAN3Q58A45 887 aaKnown RBP13.03□□□□□ -0.32
SHOX2-202ENST00000425436 TEX261Q6UWH6 196 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 OR8H1Q8NGG4 311 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 THAP6Q8TBB0 222 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 GALNT14Q96FL9 552 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 CYYR1Q96J86 154 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 SUCNR1Q9BXA5 334 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms