RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 IRF3Q14653 427 aa17.12■□□□□ 0.33
CDCP1-202ENST00000425231 SAMD5Q5TGI4 173 aa17.12■□□□□ 0.33
CDCP1-202ENST00000425231 OR4K15Q8NH41 348 aa17.12■□□□□ 0.33
CDCP1-202ENST00000425231 R3HDM4Q96D70 268 aa17.12■□□□□ 0.33
CDCP1-202ENST00000425231 GHRLQ9UBU3 117 aa17.12■□□□□ 0.33
CDCP1-202ENST00000425231 TRAPPC2LQ9UL33 140 aa17.12■□□□□ 0.33
CDCP1-202ENST00000425231 MOB4Q9Y3A3 225 aa17.12■□□□□ 0.33
CDCP1-202ENST00000425231 IGHV3-43A0A0B4J1X8 118 aa17.11■□□□□ 0.33
CDCP1-202ENST00000425231 C12orf77C9JDV5 145 aa17.11■□□□□ 0.33
CDCP1-202ENST00000425231 H0YHG0 523 aa17.11■□□□□ 0.33
CDCP1-202ENST00000425231 HSD17B6O14756 317 aa17.11■□□□□ 0.33
CDCP1-202ENST00000425231 IGHV3-43DP0DP04 118 aa17.11■□□□□ 0.33
CDCP1-202ENST00000425231 FUT3P21217 361 aa17.11■□□□□ 0.33
CDCP1-202ENST00000425231 BEAN1Q3B7T3 259 aa17.11■□□□□ 0.33
CDCP1-202ENST00000425231 LRRTM1Q86UE6 522 aa17.11■□□□□ 0.33
CDCP1-202ENST00000425231 OR4F17Q8NGA8 305 aa17.11■□□□□ 0.33
CDCP1-202ENST00000425231 ST6GALNAC6Q969X2 333 aa17.11■□□□□ 0.33
CDCP1-202ENST00000425231 OR4F4Q96R69 305 aa17.11■□□□□ 0.33
CDCP1-202ENST00000425231 TMED9Q9BVK6 235 aa17.11■□□□□ 0.33
CDCP1-202ENST00000425231 GAPDHP04406 335 aaKnown RBP17.1■□□□□ 0.33
CDCP1-202ENST00000425231 GLAP06280 429 aa17.1■□□□□ 0.33
CDCP1-202ENST00000425231 GPR50Q13585 617 aa17.1■□□□□ 0.33
CDCP1-202ENST00000425231 EBI3Q14213 229 aa17.1■□□□□ 0.33
CDCP1-202ENST00000425231 HES1Q14469 280 aa17.1■□□□□ 0.33
CDCP1-202ENST00000425231 MED22Q15528 200 aa17.1■□□□□ 0.33
CDCP1-202ENST00000425231 C10orf99Q6UWK7 81 aa17.1■□□□□ 0.33
CDCP1-202ENST00000425231 C5orf56Q8N8D9 126 aa17.1■□□□□ 0.33
CDCP1-202ENST00000425231 PHYHIPQ92561 330 aa17.1■□□□□ 0.33
CDCP1-202ENST00000425231 FAM46BQ96A09 425 aa17.1■□□□□ 0.33
CDCP1-202ENST00000425231 DUSP21Q9H596 190 aa17.1■□□□□ 0.33
CDCP1-202ENST00000425231 IGHV1-3A0A0C4DH29 117 aa17.09■□□□□ 0.33
CDCP1-202ENST00000425231 CCRL2O00421 344 aa17.09■□□□□ 0.33
CDCP1-202ENST00000425231 CA11O75493 328 aa17.09■□□□□ 0.33
CDCP1-202ENST00000425231 IGKV1D-33P01593 117 aa17.09■□□□□ 0.33
CDCP1-202ENST00000425231 IGKV1-33P01594 117 aa17.09■□□□□ 0.33
CDCP1-202ENST00000425231 CD37P11049 281 aa17.09■□□□□ 0.33
CDCP1-202ENST00000425231 TMEM11P17152 192 aa17.09■□□□□ 0.33
CDCP1-202ENST00000425231 RCC1P18754 421 aaPredicted RBP17.09■□□□□ 0.33
CDCP1-202ENST00000425231 REG1BP48304 166 aa17.09■□□□□ 0.33
CDCP1-202ENST00000425231 HNF4GQ14541 408 aa17.09■□□□□ 0.33
CDCP1-202ENST00000425231 Q3ZCU0 254 aa17.09■□□□□ 0.33
CDCP1-202ENST00000425231 C9orf152Q5JTZ5 239 aa17.09■□□□□ 0.33
CDCP1-202ENST00000425231 C1orf100Q5SVJ3 147 aa17.09■□□□□ 0.33
CDCP1-202ENST00000425231 KPRPQ5T749 579 aaPredicted RBP17.09■□□□□ 0.33
CDCP1-202ENST00000425231 ZNF439Q8NDP4 499 aa17.09■□□□□ 0.33
CDCP1-202ENST00000425231 UBE2QL1A1L167 161 aa17.08■□□□□ 0.32
CDCP1-202ENST00000425231 SLC31A2O15432 143 aa17.08■□□□□ 0.32
CDCP1-202ENST00000425231 SPINT2O43291 252 aa17.08■□□□□ 0.32
CDCP1-202ENST00000425231 HBZP02008 142 aa17.08■□□□□ 0.32
CDCP1-202ENST00000425231 SRMP19623 302 aa17.08■□□□□ 0.32
CDCP1-202ENST00000425231 MYF6P23409 242 aa17.08■□□□□ 0.32
CDCP1-202ENST00000425231 ZNF134P52741 427 aa17.08■□□□□ 0.32
CDCP1-202ENST00000425231 C6orf183Q5T699 404 aa17.08■□□□□ 0.32
CDCP1-202ENST00000425231 CEACAM19Q7Z692 300 aa17.08■□□□□ 0.32
CDCP1-202ENST00000425231 MOB3BQ86TA1 216 aa17.08■□□□□ 0.32
CDCP1-202ENST00000425231 ANKRD60Q9BZ19 345 aa17.08■□□□□ 0.32
CDCP1-202ENST00000425231 CST11Q9H112 138 aa17.08■□□□□ 0.32
CDCP1-202ENST00000425231 MBNL3Q9NUK0 354 aaKnown RBP17.08■□□□□ 0.32
CDCP1-202ENST00000425231 TPRKBQ9Y3C4 175 aa17.08■□□□□ 0.32
CDCP1-202ENST00000425231 NOTCH3Q9UM47 2321 aa17.08■□□□□ 0.32
CDCP1-202ENST00000425231 A0A1W2PRX2 142 aa17.07■□□□□ 0.32
CDCP1-202ENST00000425231 FGF16O43320 207 aa17.07■□□□□ 0.32
CDCP1-202ENST00000425231 PDCD6O75340 191 aa17.07■□□□□ 0.32
CDCP1-202ENST00000425231 UBBP0CG47 229 aa17.07■□□□□ 0.32
CDCP1-202ENST00000425231 VSIG8P0DPA2 414 aa17.07■□□□□ 0.32
CDCP1-202ENST00000425231 GLT8D1Q68CQ7 371 aa17.07■□□□□ 0.32
CDCP1-202ENST00000425231 OR10K2Q6IF99 312 aa17.07■□□□□ 0.32
CDCP1-202ENST00000425231 SLC25A48Q6ZT89 311 aaKnown RBP17.07■□□□□ 0.32
CDCP1-202ENST00000425231 PRR18Q8N4B5 295 aa17.07■□□□□ 0.32
CDCP1-202ENST00000425231 OR1L1Q8NH94 360 aa17.07■□□□□ 0.32
CDCP1-202ENST00000425231 RTN4IP1Q8WWV3 396 aaPredicted RBP17.07■□□□□ 0.32
CDCP1-202ENST00000425231 RAB9BQ9NP90 201 aa17.07■□□□□ 0.32
CDCP1-202ENST00000425231 IGHV3-72A0A0B4J1Y9 119 aa17.06■□□□□ 0.32
CDCP1-202ENST00000425231 TCRBV4S1A1TA0A5B7 111 aa17.06■□□□□ 0.32
CDCP1-202ENST00000425231 MPIG6BO95866 241 aa17.06■□□□□ 0.32
CDCP1-202ENST00000425231 UCHL1P09936 223 aa17.06■□□□□ 0.32
CDCP1-202ENST00000425231 TMEM30BQ3MIR4 351 aa17.06■□□□□ 0.32
CDCP1-202ENST00000425231 CT45A1Q5HYN5 189 aa17.06■□□□□ 0.32
CDCP1-202ENST00000425231 RBM48Q5RL73 367 aaKnown RBP17.06■□□□□ 0.32
CDCP1-202ENST00000425231 LIPKQ5VXJ0 399 aa17.06■□□□□ 0.32
CDCP1-202ENST00000425231 TRAT1Q6PIZ9 186 aa17.06■□□□□ 0.32
CDCP1-202ENST00000425231 CT45A3Q8NHU0 189 aa17.06■□□□□ 0.32
CDCP1-202ENST00000425231 EAF1Q96JC9 268 aaPredicted RBP17.06■□□□□ 0.32
CDCP1-202ENST00000425231 TAF9BQ9HBM6 251 aa17.06■□□□□ 0.32
CDCP1-202ENST00000425231 GNG12Q9UBI6 72 aa17.06■□□□□ 0.32
CDCP1-202ENST00000425231 TSSC4Q9Y5U2 329 aaPredicted RBP17.06■□□□□ 0.32
CDCP1-202ENST00000425231 ZNF137PP52743 207 aa17.05■□□□□ 0.32
CDCP1-202ENST00000425231 TPBGQ13641 420 aa17.05■□□□□ 0.32
CDCP1-202ENST00000425231 HSD17B12Q53GQ0 312 aa17.05■□□□□ 0.32
CDCP1-202ENST00000425231 OXLD1Q5BKU9 147 aa17.05■□□□□ 0.32
CDCP1-202ENST00000425231 C5orf24Q7Z6I8 188 aa17.05■□□□□ 0.32
CDCP1-202ENST00000425231 IZUMO1Q8IYV9 350 aa17.05■□□□□ 0.32
CDCP1-202ENST00000425231 Q8N6K4 173 aa17.05■□□□□ 0.32
CDCP1-202ENST00000425231 OR4X2Q8NGF9 303 aa17.05■□□□□ 0.32
CDCP1-202ENST00000425231 OR10V1Q8NGI7 309 aa17.05■□□□□ 0.32
CDCP1-202ENST00000425231 MRPL30Q8TCC3 161 aaKnown RBP17.05■□□□□ 0.32
CDCP1-202ENST00000425231 UFD1Q92890 307 aa17.05■□□□□ 0.32
CDCP1-202ENST00000425231 TMEM203Q969S6 136 aa17.05■□□□□ 0.32
CDCP1-202ENST00000425231 SLC22A1O15245 554 aa17.04■□□□□ 0.32
CDCP1-202ENST00000425231 CRHBPP24387 322 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms