RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 FRMD6-AS1P0C7T7 363 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 TAS2R30P59541 319 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 HERV-K104P61576 105 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 PMP22Q01453 160 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 ARL16Q0P5N6 197 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 ARL6IP1Q15041 203 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 COL5A1-AS1Q5SY13 56 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 DNM1P34Q6PK57 102 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 OR2T10Q8NGZ9 312 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 FAM131CQ96AQ9 280 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 HSPB9Q9BQS6 159 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 MANBALQ9NQG1 85 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 SLC7A10Q9NS82 523 aa9.72□□□□□ -0.85
SEC61A1-202ENST00000424880 C20orf202A1L168 122 aa9.71□□□□□ -0.85
SEC61A1-202ENST00000424880 MPPED1O15442 326 aa9.71□□□□□ -0.85
SEC61A1-202ENST00000424880 KLF3P57682 345 aaPredicted RBP9.71□□□□□ -0.85
SEC61A1-202ENST00000424880 TMEM41BQ5BJD5 291 aa9.71□□□□□ -0.85
SEC61A1-202ENST00000424880 HLA-DQA1Q5Y7H0 255 aa9.71□□□□□ -0.85
SEC61A1-202ENST00000424880 SYT13Q7L8C5 426 aa9.71□□□□□ -0.85
SEC61A1-202ENST00000424880 ZDHHC23Q8IYP9 409 aa9.71□□□□□ -0.85
SEC61A1-202ENST00000424880 OR51H1Q8NH63 302 aa9.71□□□□□ -0.85
SEC61A1-202ENST00000424880 ALKBH3Q96Q83 286 aaPredicted RBP9.71□□□□□ -0.85
SEC61A1-202ENST00000424880 PARLQ9H300 379 aa9.71□□□□□ -0.85
SEC61A1-202ENST00000424880 PCDH15Q96QU1 1955 aa9.71□□□□□ -0.85
SEC61A1-202ENST00000424880 PDGFBP01127 241 aaPredicted RBP9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 PPBPP02775 128 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 MYBPHQ13203 477 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 DEGS2Q6QHC5 323 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 H1FNTQ75WM6 255 aaPredicted RBP9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 LHX4Q969G2 390 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 GNPNAT1Q96EK6 184 aaPredicted RBP9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 BMFQ96LC9 184 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 OR51I2Q9H344 312 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 CISD1Q9NZ45 108 aaKnown RBP9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 RNF115Q9Y4L5 304 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 MAP1LC3B2A6NCE7 125 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 ANKUB1A6NFN9 424 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 B4DGG1 531 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 ZNF732B4DXR9 585 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 TNFRSF10CO14798 259 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 TNFSF13O75888 250 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 ECI1P42126 302 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 ZNF818PQ6ZRF7 136 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 GAPTQ8N292 157 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 UBALD1Q8TB05 177 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 ZCCHC14Q8WYQ9 949 aaKnown RBP9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 MAP1LC3BQ9GZQ8 125 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 SOHLH2Q9NX45 425 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 TP73-AS1Q9UF72 201 aa9.71□□□□□ -0.86
SEC61A1-202ENST00000424880 SPINK4O60575 86 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 IGKV1D-33P01593 117 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 IGKV1-33P01594 117 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 IGHEP01854 428 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 HBE1P02100 147 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 KIR2DL1P43626 348 aaPredicted RBP9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 PAX9P55771 341 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 ACTL10Q5JWF8 245 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 UNQ5815/PRO19632Q6UWF5 114 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 DERL1Q9BUN8 251 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 ZNF442Q9H7R0 627 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 GPR35Q9HC97 309 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 OR6C3Q9NZP0 311 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 KNTC1P50748 2209 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 RALGAPA1Q6GYQ0 2036 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 IGKV1-27A0A075B6S5 117 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 OR7C1O76099 320 aaPredicted RBP9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 NDUFB8O95169 186 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 CDS2O95674 445 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 PPYP01298 95 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 IFNA5P01569 189 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 RAC2P15153 192 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 IL3RAP26951 378 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 UBE2G2P60604 165 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 KRTDAPP60985 99 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 OR8G2PQ6IF36 304 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 YAF2Q8IY57 180 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 ORAOV1Q8WV07 137 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 NAT8Q9UHE5 227 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 COL4A2P08572 1712 aa9.7□□□□□ -0.86
SEC61A1-202ENST00000424880 IGKV1D-13A0A0B4J2D9 117 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 TRBV11-1A0A0K0K1C0 115 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 SH2D1BO14796 132 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 IGKV1-13P0DP09 117 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 HINT1P49773 126 aaPredicted RBP9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 SNAI3Q3KNW1 292 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 GRINAQ7Z429 371 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 LYG1Q8N1E2 194 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 CADM4Q8NFZ8 388 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 SCGB1C1Q8TD33 95 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 BTF3L4Q96K17 158 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 VAMP8Q9BV40 100 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 HRASP01112 189 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 PATE4P0C8F1 98 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 TDGF1P13385 188 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 HIST1H3AP68431 136 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 HHEXQ03014 270 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 IL24Q13007 206 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 NSDHLQ15738 373 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 FAM189A2Q15884 450 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 MAJINQ3KP22 176 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms