RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 CRTAPO75718 401 aaPredicted RBP20.23■□□□□ 0.83
SMDT1-202ENST00000422252 PRB2P02812 416 aaPredicted RBP20.23■□□□□ 0.83
SMDT1-202ENST00000422252 CD33P20138 364 aa20.23■□□□□ 0.83
SMDT1-202ENST00000422252 REG1BP48304 166 aa20.23■□□□□ 0.83
SMDT1-202ENST00000422252 Q3ZCU0 254 aa20.23■□□□□ 0.83
SMDT1-202ENST00000422252 TMEM104Q8NE00 496 aa20.23■□□□□ 0.83
SMDT1-202ENST00000422252 WFDC9Q8NEX5 89 aa20.23■□□□□ 0.83
SMDT1-202ENST00000422252 UQCC2Q9BRT2 126 aa20.23■□□□□ 0.83
SMDT1-202ENST00000422252 PEX16Q9Y5Y5 336 aa20.23■□□□□ 0.83
SMDT1-202ENST00000422252 PSMB11A5LHX3 300 aa20.22■□□□□ 0.83
SMDT1-202ENST00000422252 C12orf77C9JDV5 145 aa20.22■□□□□ 0.83
SMDT1-202ENST00000422252 ANKRD65E5RJM6 399 aa20.22■□□□□ 0.83
SMDT1-202ENST00000422252 SPINT2O43291 252 aa20.22■□□□□ 0.83
SMDT1-202ENST00000422252 CDK1P06493 297 aa20.22■□□□□ 0.83
SMDT1-202ENST00000422252 IL3RAP26951 378 aa20.22■□□□□ 0.83
SMDT1-202ENST00000422252 EBI3Q14213 229 aa20.22■□□□□ 0.83
SMDT1-202ENST00000422252 KHDC1LQ5JSQ8 128 aa20.22■□□□□ 0.83
SMDT1-202ENST00000422252 C6orf183Q5T699 404 aa20.22■□□□□ 0.83
SMDT1-202ENST00000422252 RNLSQ5VYX0 342 aa20.22■□□□□ 0.83
SMDT1-202ENST00000422252 FAM53AQ6NSI3 398 aaPredicted RBP20.22■□□□□ 0.83
SMDT1-202ENST00000422252 GAPTQ8N292 157 aa20.22■□□□□ 0.83
SMDT1-202ENST00000422252 OR4K15Q8NH41 348 aa20.22■□□□□ 0.83
SMDT1-202ENST00000422252 Q96M66 194 aa20.22■□□□□ 0.83
SMDT1-202ENST00000422252 MND1Q9BWT6 205 aa20.22■□□□□ 0.83
SMDT1-202ENST00000422252 CA11O75493 328 aa20.21■□□□□ 0.83
SMDT1-202ENST00000422252 SC5DO75845 299 aa20.21■□□□□ 0.83
SMDT1-202ENST00000422252 PF4P02776 101 aa20.21■□□□□ 0.83
SMDT1-202ENST00000422252 TMEM30BQ3MIR4 351 aa20.21■□□□□ 0.83
SMDT1-202ENST00000422252 PHF21AQ96BD5 680 aa20.21■□□□□ 0.83
SMDT1-202ENST00000422252 DCLRE1BQ9H816 532 aa20.21■□□□□ 0.83
SMDT1-202ENST00000422252 GHRLQ9UBU3 117 aa20.21■□□□□ 0.83
SMDT1-202ENST00000422252 NOTCH3Q9UM47 2321 aa20.21■□□□□ 0.83
SMDT1-202ENST00000422252 IGHV3-72A0A0B4J1Y9 119 aa20.2■□□□□ 0.82
SMDT1-202ENST00000422252 GLAP06280 429 aa20.2■□□□□ 0.82
SMDT1-202ENST00000422252 FUT3P21217 361 aa20.2■□□□□ 0.82
SMDT1-202ENST00000422252 VHLP40337 213 aa20.2■□□□□ 0.82
SMDT1-202ENST00000422252 GABPB1Q06547 395 aaPredicted RBP20.2■□□□□ 0.82
SMDT1-202ENST00000422252 GPR50Q13585 617 aa20.2■□□□□ 0.82
SMDT1-202ENST00000422252 TRAT1Q6PIZ9 186 aa20.2■□□□□ 0.82
SMDT1-202ENST00000422252 IZUMO1Q8IYV9 350 aa20.2■□□□□ 0.82
SMDT1-202ENST00000422252 MS4A15Q8N5U1 240 aa20.2■□□□□ 0.82
SMDT1-202ENST00000422252 RTN4IP1Q8WWV3 396 aaPredicted RBP20.2■□□□□ 0.82
SMDT1-202ENST00000422252 SGCDQ92629 289 aa20.2■□□□□ 0.82
SMDT1-202ENST00000422252 ST6GALNAC6Q969X2 333 aa20.2■□□□□ 0.82
SMDT1-202ENST00000422252 NECAP2Q9NVZ3 263 aa20.2■□□□□ 0.82
SMDT1-202ENST00000422252 GNG12Q9UBI6 72 aa20.2■□□□□ 0.82
SMDT1-202ENST00000422252 HBZP02008 142 aa20.19■□□□□ 0.82
SMDT1-202ENST00000422252 INSL4Q14641 139 aa20.19■□□□□ 0.82
SMDT1-202ENST00000422252 ACSM3Q53FZ2 586 aa20.19■□□□□ 0.82
SMDT1-202ENST00000422252 C6orf141Q5SZD1 244 aa20.19■□□□□ 0.82
SMDT1-202ENST00000422252 SIGIRRQ6IA17 410 aa20.19■□□□□ 0.82
SMDT1-202ENST00000422252 UNQ9370/PRO34162Q6UXP9 181 aa20.19■□□□□ 0.82
SMDT1-202ENST00000422252 SLC25A48Q6ZT89 311 aaKnown RBP20.19■□□□□ 0.82
SMDT1-202ENST00000422252 ZNF329Q86UD4 541 aa20.19■□□□□ 0.82
SMDT1-202ENST00000422252 PRR18Q8N4B5 295 aa20.19■□□□□ 0.82
SMDT1-202ENST00000422252 ZNF439Q8NDP4 499 aa20.19■□□□□ 0.82
SMDT1-202ENST00000422252 OR1L1Q8NH94 360 aa20.19■□□□□ 0.82
SMDT1-202ENST00000422252 CHPT1Q8WUD6 406 aa20.19■□□□□ 0.82
SMDT1-202ENST00000422252 FAM46BQ96A09 425 aa20.19■□□□□ 0.82
SMDT1-202ENST00000422252 EAF1Q96JC9 268 aaPredicted RBP20.19■□□□□ 0.82
SMDT1-202ENST00000422252 NOL4LQ96MY1 436 aaPredicted RBP20.19■□□□□ 0.82
SMDT1-202ENST00000422252 CST11Q9H112 138 aa20.19■□□□□ 0.82
SMDT1-202ENST00000422252 UBE2QL1A1L167 161 aa20.18■□□□□ 0.82
SMDT1-202ENST00000422252 SERPINE3A8MV23 424 aa20.18■□□□□ 0.82
SMDT1-202ENST00000422252 PTGES3LE9PB15 166 aa20.18■□□□□ 0.82
SMDT1-202ENST00000422252 SLC31A2O15432 143 aa20.18■□□□□ 0.82
SMDT1-202ENST00000422252 IGLL1P15814 213 aa20.18■□□□□ 0.82
SMDT1-202ENST00000422252 RCC1P18754 421 aaPredicted RBP20.18■□□□□ 0.82
SMDT1-202ENST00000422252 SLC35E3Q7Z769 313 aa20.18■□□□□ 0.82
SMDT1-202ENST00000422252 Q8N6K4 173 aa20.18■□□□□ 0.82
SMDT1-202ENST00000422252 OR10V1Q8NGI7 309 aa20.18■□□□□ 0.82
SMDT1-202ENST00000422252 OR2T10Q8NGZ9 312 aa20.18■□□□□ 0.82
SMDT1-202ENST00000422252 NKX1-2Q9UD57 310 aaPredicted RBP20.18■□□□□ 0.82
SMDT1-202ENST00000422252 DNAH3Q8TD57 4116 aa20.17■□□□□ 0.82
SMDT1-202ENST00000422252 NCBP2LA6PVI3 153 aaKnown RBP20.17■□□□□ 0.82
SMDT1-202ENST00000422252 PDCD6O75340 191 aa20.17■□□□□ 0.82
SMDT1-202ENST00000422252 IGHG2P01859 326 aa20.17■□□□□ 0.82
SMDT1-202ENST00000422252 CD1BP29016 333 aa20.17■□□□□ 0.82
SMDT1-202ENST00000422252 GP2P55259 537 aaKnown RBP20.17■□□□□ 0.82
SMDT1-202ENST00000422252 FAM27D1Q5T7N8 215 aa20.17■□□□□ 0.82
SMDT1-202ENST00000422252 Q6ZPA2 131 aa20.17■□□□□ 0.82
SMDT1-202ENST00000422252 TGIF2LXQ8IUE1 241 aa20.17■□□□□ 0.82
SMDT1-202ENST00000422252 TMED9Q9BVK6 235 aa20.17■□□□□ 0.82
SMDT1-202ENST00000422252 SCN3BQ9NY72 215 aa20.17■□□□□ 0.82
SMDT1-202ENST00000422252 LSM2Q9Y333 95 aaKnown RBP20.17■□□□□ 0.82
SMDT1-202ENST00000422252 H0YHG0 523 aa20.16■□□□□ 0.82
SMDT1-202ENST00000422252 TXNL1O43396 289 aa20.16■□□□□ 0.82
SMDT1-202ENST00000422252 UBBP0CG47 229 aa20.16■□□□□ 0.82
SMDT1-202ENST00000422252 ZNF134P52741 427 aa20.16■□□□□ 0.82
SMDT1-202ENST00000422252 ZNF137PP52743 207 aa20.16■□□□□ 0.82
SMDT1-202ENST00000422252 SLC35A2P78381 396 aa20.16■□□□□ 0.82
SMDT1-202ENST00000422252 SPHARQ15513 63 aa20.16■□□□□ 0.82
SMDT1-202ENST00000422252 CT45A1Q5HYN5 189 aa20.16■□□□□ 0.82
SMDT1-202ENST00000422252 FOXB2Q5VYV0 432 aa20.16■□□□□ 0.82
SMDT1-202ENST00000422252 GLT8D1Q68CQ7 371 aa20.16■□□□□ 0.82
SMDT1-202ENST00000422252 LRRTM1Q86UE6 522 aa20.16■□□□□ 0.82
SMDT1-202ENST00000422252 FOXRED2Q8IWF2 684 aa20.16■□□□□ 0.82
SMDT1-202ENST00000422252 CT45A3Q8NHU0 189 aa20.16■□□□□ 0.82
SMDT1-202ENST00000422252 PHYHIPQ92561 330 aa20.16■□□□□ 0.82
SMDT1-202ENST00000422252 CYYR1Q96J86 154 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms