RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 THBS3P49746 956 aa9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 RPS11P62280 158 aaKnown RBP eCLIP9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 TRAT1Q6PIZ9 186 aa9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 CDH26Q8IXH8 852 aa9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 JAGN1Q8N5M9 183 aa9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 Q8N6K4 173 aa9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 ZNF485Q8NCK3 441 aa9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 OR8H1Q8NGG4 311 aa9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 CCDC107Q8WV48 283 aa9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 RTN4IP1Q8WWV3 396 aaPredicted RBP9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 THRSPQ92748 146 aa9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 MUL1Q969V5 352 aa9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 ORAI1Q96D31 301 aa9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 EAF1Q96JC9 268 aaPredicted RBP9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 OR14A2Q96R54 314 aa9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 GON7Q9BXV9 100 aa9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 GNG12Q9UBI6 72 aa9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 CLEC2DQ9UHP7 191 aa9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 MRPS28Q9Y2Q9 187 aaKnown RBP9.12□□□□□ -0.95
SQSTM1-203ENST00000422245 IGHV3-72A0A0B4J1Y9 119 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 EFCAB10A6NFE3 127 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 C12orf77C9JDV5 145 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 MCRIP1C9JLW8 97 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 RRP9O43818 475 aaKnown RBP9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 MOSP00540 346 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 CD1BP29016 333 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 ZNF137PP52743 207 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 KRTAP10-11P60412 298 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 DCTN2Q13561 401 aaKnown RBP9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 AWAT2Q6E213 333 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 RAB12Q6IQ22 244 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 TEX38Q6PEX7 206 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 GLIPR1L1Q6UWM5 242 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 SLC25A48Q6ZT89 311 aaKnown RBP9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 C8orf86Q6ZUL3 223 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 ZNF695Q8IW36 515 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 GAPTQ8N292 157 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 NKAIN3Q8N8D7 197 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 ZFP41Q8N8Y5 198 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 TMEM104Q8NE00 496 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 KLHL30-AS1Q8NEE0 82 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 UBALD1Q8TB05 177 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 ST6GALNAC6Q969X2 333 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 ABCG5Q9H222 651 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 ETAA1Q9NY74 926 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 CNOT2Q9NZN8 540 aaKnown RBP9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 ZMAT5Q9UDW3 170 aaKnown RBP9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 LINC00527Q9UJ94 153 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 TRAPPC2LQ9UL33 140 aa9.11□□□□□ -0.95
SQSTM1-203ENST00000422245 IGHV3-43A0A0B4J1X8 118 aa9.1□□□□□ -0.95
SQSTM1-203ENST00000422245 CD1AP06126 327 aa9.1□□□□□ -0.95
SQSTM1-203ENST00000422245 GLAP06280 429 aa9.1□□□□□ -0.95
SQSTM1-203ENST00000422245 IGHV3-43DP0DP04 118 aa9.1□□□□□ -0.95
SQSTM1-203ENST00000422245 MAPK3P27361 379 aaPredicted RBP9.1□□□□□ -0.95
SQSTM1-203ENST00000422245 HOXD3P31249 432 aaPredicted RBP9.1□□□□□ -0.95
SQSTM1-203ENST00000422245 ST3GAL4Q11206 333 aa9.1□□□□□ -0.95
SQSTM1-203ENST00000422245 PNLIPRP3Q17RR3 467 aa9.1□□□□□ -0.95
SQSTM1-203ENST00000422245 SYT6Q5T7P8 510 aaPredicted RBP9.1□□□□□ -0.95
SQSTM1-203ENST00000422245 DHRSXQ8N5I4 330 aa9.1□□□□□ -0.95
SQSTM1-203ENST00000422245 Q8N9W7 124 aa9.1□□□□□ -0.95
SQSTM1-203ENST00000422245 ZNF439Q8NDP4 499 aa9.1□□□□□ -0.95
SQSTM1-203ENST00000422245 DERL3Q96Q80 235 aa9.1□□□□□ -0.95
SQSTM1-203ENST00000422245 P2RX4Q99571 388 aa9.1□□□□□ -0.95
SQSTM1-203ENST00000422245 ZNF580Q9UK33 172 aa9.1□□□□□ -0.95
SQSTM1-203ENST00000422245 WI2-2373I1.2A0A1W2PRP0 233 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 H0YHG0 523 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 MYL12BO14950 172 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 SLC31A2O15432 143 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 CRTAPO75718 401 aaPredicted RBP9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 SC5DO75845 299 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 HBZP02008 142 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 MGMTP16455 207 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 GP2P55259 537 aaKnown RBP9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 ADARB1P78563 741 aaKnown RBP9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 FOXE3Q13461 319 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 DOC2BQ14184 412 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 LRRC36Q1X8D7 754 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 CXorf66Q5JRM2 361 aaPredicted RBP9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 VAX1Q5SQQ9 334 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 STEAP3Q658P3 488 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 C18orf65Q6ZTR6 163 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 ZNF554Q86TJ5 538 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 RNF152Q8N8N0 203 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 OR10V1Q8NGI7 309 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 OR8U1Q8NH10 309 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 OR4K15Q8NH41 348 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 GGHQ92820 318 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 Q96M66 194 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 S1PR3Q99500 378 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 RASL11BQ9BPW5 248 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 UQCC2Q9BRT2 126 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 SELENOIQ9C0D9 397 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 CST11Q9H112 138 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 GHRLQ9UBU3 117 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 PEX16Q9Y5Y5 336 aa9.09□□□□□ -0.95
SQSTM1-203ENST00000422245 PNMA8CA0A1B0GUJ8 204 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 A0A1W2PPK0 400 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 LANCL1O43813 399 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 PDCD6O75340 191 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 MAS1P04201 325 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms