RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 ZNHIT1O43257 154 aa18.19■□□□□ 0.5
USP48-205ENST00000421625 TUSC2O75896 110 aa18.19■□□□□ 0.5
USP48-205ENST00000421625 PFN1P07737 140 aaKnown RBP18.19■□□□□ 0.5
USP48-205ENST00000421625 METTL15P1P0C7V9 234 aa18.19■□□□□ 0.5
USP48-205ENST00000421625 FOXO1Q12778 655 aa18.19■□□□□ 0.5
USP48-205ENST00000421625 LBHQ53QV2 105 aaPredicted RBP18.19■□□□□ 0.5
USP48-205ENST00000421625 Q6ZRM9 215 aa18.19■□□□□ 0.5
USP48-205ENST00000421625 OR51H1Q8NH63 302 aa18.19■□□□□ 0.5
USP48-205ENST00000421625 WASF3Q9UPY6 502 aa18.19■□□□□ 0.5
USP48-205ENST00000421625 EREGO14944 169 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 TCAPO15273 167 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 CYTIPO60759 359 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 SLC25A45Q8N413 288 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 DNASE2BQ8WZ79 361 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 NEU1Q99519 415 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 TMEM38BQ9NVV0 291 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 NAPSAO96009 420 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 CST2P09228 141 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 CEACAM6P40199 344 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 NOL4LQ96MY1 436 aaPredicted RBP18.18■□□□□ 0.5
USP48-205ENST00000421625 SMIM7Q9BQ49 75 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 ZNF816-ZNF321PA0A0X1KG74 233 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 ZIC3O60481 467 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 CCL3P10147 92 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 ELLP55199 621 aaPredicted RBP18.18■□□□□ 0.5
USP48-205ENST00000421625 NCR3LG1Q68D85 454 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 WDR74Q6RFH5 385 aaPredicted RBP18.18■□□□□ 0.5
USP48-205ENST00000421625 Q6ZS49 121 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 RAB24Q969Q5 203 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 P2RX4Q99571 388 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 DDA1Q9BW61 102 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 PRO3102Q9H379 93 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 PLK3Q9H4B4 646 aa18.18■□□□□ 0.5
USP48-205ENST00000421625 ZNF407Q9C0G0 2248 aa18.17■□□□□ 0.5
USP48-205ENST00000421625 TP53I11O14683 189 aa18.17■□□□□ 0.5
USP48-205ENST00000421625 EDN3P14138 238 aa18.17■□□□□ 0.5
USP48-205ENST00000421625 MDH2P40926 338 aaKnown RBP18.17■□□□□ 0.5
USP48-205ENST00000421625 HAPLN4Q86UW8 402 aa18.17■□□□□ 0.5
USP48-205ENST00000421625 ZNF525Q8N782 197 aa18.17■□□□□ 0.5
USP48-205ENST00000421625 NEK7Q8TDX7 302 aa18.17■□□□□ 0.5
USP48-205ENST00000421625 ELOVL1Q9BW60 279 aa18.17■□□□□ 0.5
USP48-205ENST00000421625 WNT5BQ9H1J7 359 aa18.17■□□□□ 0.5
USP48-205ENST00000421625 PSG2P11465 335 aa18.17■□□□□ 0.5
USP48-205ENST00000421625 F2RP25116 425 aa18.17■□□□□ 0.5
USP48-205ENST00000421625 KRTAP27-1Q3LI81 207 aa18.17■□□□□ 0.5
USP48-205ENST00000421625 ZNF66Q6ZN08 573 aa18.17■□□□□ 0.5
USP48-205ENST00000421625 MAP1LC3B2A6NCE7 125 aa18.16■□□□□ 0.5
USP48-205ENST00000421625 HNF4GQ14541 408 aa18.16■□□□□ 0.5
USP48-205ENST00000421625 RTP5Q14D33 572 aa18.16■□□□□ 0.5
USP48-205ENST00000421625 MRGPRGQ86SM5 289 aa18.16■□□□□ 0.5
USP48-205ENST00000421625 MAP1LC3BQ9GZQ8 125 aa18.16■□□□□ 0.5
USP48-205ENST00000421625 NAT8Q9UHE5 227 aa18.16■□□□□ 0.5
USP48-205ENST00000421625 KIAA1549Q9HCM3 1950 aa18.16■□□□□ 0.5
USP48-205ENST00000421625 CNOT4O95628 575 aaKnown RBP18.16■□□□□ 0.5
USP48-205ENST00000421625 RNPS1Q15287 305 aaKnown RBP18.16■□□□□ 0.5
USP48-205ENST00000421625 TRIM61Q5EBN2 209 aa18.16■□□□□ 0.5
USP48-205ENST00000421625 IL22RA2Q969J5 263 aa18.16■□□□□ 0.5
USP48-205ENST00000421625 RAB40CQ96S21 281 aa18.16■□□□□ 0.5
USP48-205ENST00000421625 PYGO2Q9BRQ0 406 aa18.16■□□□□ 0.5
USP48-205ENST00000421625 ATG101Q9BSB4 218 aa18.16■□□□□ 0.5
USP48-205ENST00000421625 CRIM1Q9NZV1 1036 aa18.16■□□□□ 0.5
USP48-205ENST00000421625 PRSS50Q9UI38 385 aa18.16■□□□□ 0.5
USP48-205ENST00000421625 ZNF737O75373 536 aa18.15■□□□□ 0.5
USP48-205ENST00000421625 RPUSD4Q96CM3 377 aaKnown RBP18.15■□□□□ 0.5
USP48-205ENST00000421625 OR2H1Q9GZK4 316 aa18.15■□□□□ 0.5
USP48-205ENST00000421625 FGF23Q9GZV9 251 aaPredicted RBP18.15■□□□□ 0.5
USP48-205ENST00000421625 LIFP15018 202 aa18.15■□□□□ 0.5
USP48-205ENST00000421625 PRSS8Q16651 343 aa18.15■□□□□ 0.5
USP48-205ENST00000421625 OR51G1Q8NGK1 321 aa18.15■□□□□ 0.5
USP48-205ENST00000421625 PCGF1Q9BSM1 259 aa18.15■□□□□ 0.5
USP48-205ENST00000421625 PROK2Q9HC23 129 aa18.15■□□□□ 0.5
USP48-205ENST00000421625 CACNG5Q9UF02 275 aa18.15■□□□□ 0.5
USP48-205ENST00000421625 NUTF2P61970 127 aaKnown RBP18.14■□□□□ 0.5
USP48-205ENST00000421625 MRPL37Q9BZE1 423 aaKnown RBP18.14■□□□□ 0.5
USP48-205ENST00000421625 HMGB3O15347 200 aaKnown RBP18.14■□□□□ 0.49
USP48-205ENST00000421625 SERPINE2P07093 398 aa18.14■□□□□ 0.49
USP48-205ENST00000421625 GALR1P47211 349 aa18.14■□□□□ 0.49
USP48-205ENST00000421625 TMEM241Q24JQ0 296 aa18.14■□□□□ 0.49
USP48-205ENST00000421625 COA6Q5JTJ3 125 aaKnown RBP18.14■□□□□ 0.49
USP48-205ENST00000421625 C20orf204Q6ZNR8 217 aa18.14■□□□□ 0.49
USP48-205ENST00000421625 HLA-CQ95604 372 aa18.14■□□□□ 0.49
USP48-205ENST00000421625 PSMG3Q9BT73 122 aaPredicted RBP18.14■□□□□ 0.49
USP48-205ENST00000421625 PSENENQ9NZ42 101 aa18.14■□□□□ 0.49
USP48-205ENST00000421625 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 LRRC3CA6NJW4 275 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 IFNL4K9M1U5 179 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 OR4A8P0C604 315 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 RPL23P62829 140 aaKnown RBP18.13■□□□□ 0.49
USP48-205ENST00000421625 SLC10A1Q14973 349 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 BSXQ3C1V8 233 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 PCSK4Q6UW60 755 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 CYP2G1PQ6ZSU1 146 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 OR1K1Q8NGR3 316 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 TMEM37Q8WXS4 190 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 COLQQ9Y215 455 aaPredicted RBP18.13■□□□□ 0.49
USP48-205ENST00000421625 ARHGAP21Q5T5U3 1957 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 PPP5D1E7EU14 171 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 SPINK2P20155 84 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 DSCR4P56555 118 aaPredicted RBP18.13■□□□□ 0.49
USP48-205ENST00000421625 LRRC75BQ2VPJ9 315 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms