RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 COL7A1Q02388 2944 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 IGHV1-3A0A0C4DH29 117 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 H3BUI4 141 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 AIPO00170 330 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 SDCBPO00560 298 aaPredicted RBP8.73□□□□□ -1.01
SSBP3-206ENST00000420121 HSD17B6O14756 317 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 MYL12BO14950 172 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 FGF16O43320 207 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 IGKV1D-33P01593 117 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 IGKV1-33P01594 117 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 MGMTP16455 207 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 TMEM11P17152 192 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 RCC1P18754 421 aaPredicted RBP8.73□□□□□ -1.01
SSBP3-206ENST00000420121 CALRP27797 417 aaKnown RBP8.73□□□□□ -1.01
SSBP3-206ENST00000420121 REG1BP48304 166 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 ZNF134P52741 427 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 GPR176Q14439 515 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 C9orf152Q5JTZ5 239 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 FAM27D1Q5T7N8 215 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 RNLSQ5VYX0 342 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 AWAT2Q6E213 333 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 RAB12Q6IQ22 244 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 C5orf24Q7Z6I8 188 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 IZUMO1Q8IYV9 350 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 STX19Q8N4C7 294 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 OR10X1Q8NGY0 326 aa8.73□□□□□ -1.01
SSBP3-206ENST00000420121 EAF1Q96JC9 268 aaPredicted RBP8.73□□□□□ -1.01
SSBP3-206ENST00000420121 NOL4LQ96MY1 436 aaPredicted RBP8.73□□□□□ -1.01
SSBP3-206ENST00000420121 TSSC4Q9Y5U2 329 aaPredicted RBP8.73□□□□□ -1.01
SSBP3-206ENST00000420121 IGHV3-72A0A0B4J1Y9 119 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 TCRBV4S1A1TA0A5B7 111 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 FAM90A10PA6NDY2 464 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 FAM90A7PA6NKC0 464 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 LINC01548A6NM66 108 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 FAM90A23PA8MXZ1 464 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 ZNF736B4DX44 427 aaPredicted RBP8.72□□□□□ -1.01
SSBP3-206ENST00000420121 CCRL2O00421 344 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 IGHG2P01859 326 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 CDK1P06493 297 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 CD37P11049 281 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 IGLL1P15814 213 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 ZNF137PP52743 207 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 PRR20EP86478 221 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 PRR20CP86479 221 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 PRR20DP86480 221 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 PRR20BP86481 221 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 PRR20AP86496 221 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 HNF4GQ14541 408 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 IRF3Q14653 427 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 Q3ZCU0 254 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 C6orf141Q5SZD1 244 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 SYT6Q5T7P8 510 aaPredicted RBP8.72□□□□□ -1.01
SSBP3-206ENST00000420121 ETV3LQ6ZN32 361 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 SLC25A48Q6ZT89 311 aaKnown RBP8.72□□□□□ -1.01
SSBP3-206ENST00000420121 LRRTM1Q86UE6 522 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 OR4K15Q8NH41 348 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 OR1L1Q8NH94 360 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 NEK7Q8TDX7 302 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 NRG4Q8WWG1 115 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 RTN4IP1Q8WWV3 396 aaPredicted RBP8.72□□□□□ -1.01
SSBP3-206ENST00000420121 SELENOIQ9C0D9 397 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 SPACA1Q9HBV2 294 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 PLSCR3Q9NRY6 295 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 MBNL3Q9NUK0 354 aaKnown RBP8.72□□□□□ -1.01
SSBP3-206ENST00000420121 AURKAIP1Q9NWT8 199 aaPredicted RBP8.72□□□□□ -1.01
SSBP3-206ENST00000420121 ETAA1Q9NY74 926 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 PEX16Q9Y5Y5 336 aa8.72□□□□□ -1.01
SSBP3-206ENST00000420121 PSMB11A5LHX3 300 aa8.71□□□□□ -1.02
SSBP3-206ENST00000420121 MCRIP1C9JLW8 97 aa8.71□□□□□ -1.02
SSBP3-206ENST00000420121 HBZP02008 142 aa8.71□□□□□ -1.02
SSBP3-206ENST00000420121 GAPDHP04406 335 aaKnown RBP8.71□□□□□ -1.02
SSBP3-206ENST00000420121 FUT3P21217 361 aa8.71□□□□□ -1.02
SSBP3-206ENST00000420121 HES1Q14469 280 aa8.71□□□□□ -1.02
SSBP3-206ENST00000420121 ACSM3Q53FZ2 586 aa8.71□□□□□ -1.02
SSBP3-206ENST00000420121 CT45A1Q5HYN5 189 aa8.71□□□□□ -1.02
SSBP3-206ENST00000420121 FOXB2Q5VYV0 432 aa8.71□□□□□ -1.02
SSBP3-206ENST00000420121 C18orf65Q6ZTR6 163 aa8.71□□□□□ -1.02
SSBP3-206ENST00000420121 MOB3BQ86TA1 216 aa8.71□□□□□ -1.02
SSBP3-206ENST00000420121 ZNF329Q86UD4 541 aa8.71□□□□□ -1.02
SSBP3-206ENST00000420121 NKAIN3Q8N8D7 197 aa8.71□□□□□ -1.02
SSBP3-206ENST00000420121 Q8N9W7 124 aa8.71□□□□□ -1.02
SSBP3-206ENST00000420121 OR4X2Q8NGF9 303 aa8.71□□□□□ -1.02
SSBP3-206ENST00000420121 CT45A3Q8NHU0 189 aa8.71□□□□□ -1.02
SSBP3-206ENST00000420121 MRPL30Q8TCC3 161 aaKnown RBP8.71□□□□□ -1.02
SSBP3-206ENST00000420121 UQCC2Q9BRT2 126 aa8.71□□□□□ -1.02
SSBP3-206ENST00000420121 LINC00527Q9UJ94 153 aa8.71□□□□□ -1.02
SSBP3-206ENST00000420121 UBE2QL1A1L167 161 aa8.7□□□□□ -1.02
SSBP3-206ENST00000420121 PDCD6O75340 191 aa8.7□□□□□ -1.02
SSBP3-206ENST00000420121 CA11O75493 328 aa8.7□□□□□ -1.02
SSBP3-206ENST00000420121 CRTAPO75718 401 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-206ENST00000420121 GLAP06280 429 aa8.7□□□□□ -1.02
SSBP3-206ENST00000420121 VSIG8P0DPA2 414 aa8.7□□□□□ -1.02
SSBP3-206ENST00000420121 PF4V1P10720 104 aa8.7□□□□□ -1.02
SSBP3-206ENST00000420121 CD33P20138 364 aa8.7□□□□□ -1.02
SSBP3-206ENST00000420121 MAPK3P27361 379 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-206ENST00000420121 CHATP28329 748 aa8.7□□□□□ -1.02
SSBP3-206ENST00000420121 CD1BP29016 333 aa8.7□□□□□ -1.02
SSBP3-206ENST00000420121 AQP4P55087 323 aa8.7□□□□□ -1.02
SSBP3-206ENST00000420121 SLC35A2P78381 396 aa8.7□□□□□ -1.02
SSBP3-206ENST00000420121 QRFPP83859 136 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms