RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 IGHV3-43DP0DP04 118 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 FPR2P25090 351 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 PTBP1P26599 531 aaKnown RBP eCLIP6.96□□□□□ -1.3
TRIM48-201ENST00000417545 GNG10P50151 68 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 TAS2R46P59540 309 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 ZNF45Q02386 682 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 SCGB2A2Q13296 93 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 HMGN3Q15651 99 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 CR1LQ2VPA4 569 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 ZNF554Q86TJ5 538 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 CCDC190Q86UF4 302 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 PDZD9Q8IXQ8 264 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 Q8N402 240 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 OR10A7Q8NGE5 316 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 OR4A4PQ8NGN8 299 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 OR5H2Q8NGV7 314 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 OR1L1Q8NH94 360 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 OR10J5Q8NHC4 309 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 KIRREL1Q96J84 757 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 OR2S2Q9NQN1 319 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 NECAP2Q9NVZ3 263 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 ZNF69Q9UC07 566 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 SLC23A1Q9UHI7 598 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 ARHGAP32A7KAX9 2087 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 A0A1W2PRD5 423 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 A0A1W2PRF3 423 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 A0A1W2PRM7 423 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 MEIOCA2RUB1 952 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 C17orf98A8MV24 154 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 CTDSPLO15194 276 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 ST8SIA5O15466 376 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 SSX5O60225 188 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 LY6G6DO95868 133 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 IFNA6P05013 189 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 CSF1P09603 554 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 CTXN2P0C2S0 81 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 ZBTB25P24278 435 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 IL3RAP26951 378 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 PRRX1P54821 245 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 TAS2R19P59542 299 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 AP3S2P59780 193 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 TSPAN5P62079 268 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 DGCR2P98153 550 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 PAX8Q06710 450 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 ZNF846Q147U1 533 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 C17orf58Q2M2W7 97 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 ACTBL2Q562R1 376 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 KIAA2026Q5HYC2 2103 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 STEAP3Q658P3 488 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 ZNF57Q68EA5 555 aaPredicted RBP6.95□□□□□ -1.3
TRIM48-201ENST00000417545 HEPN1Q6WQI6 88 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 LINC00299Q6ZSB3 139 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 C1orf122Q6ZSJ8 110 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 TCF23Q7RTU1 214 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 TMEM17Q86X19 198 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 HOGA1Q86XE5 327 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 GAPTQ8N292 157 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 PNKDQ8N490 385 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 GVQW1Q8N7I0 195 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 OR10V1Q8NGI7 309 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 OR52I2Q8NH67 350 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 NANPQ8TBE9 248 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 SMIM4Q8WVI0 70 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 CYYR1Q96J86 154 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 ABHD1Q96SE0 405 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 CLEC7AQ9BXN2 247 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 SIRPDQ9H106 197 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 TMEM133Q9H2Q1 129 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 MBNL3Q9NUK0 354 aaKnown RBP6.95□□□□□ -1.3
TRIM48-201ENST00000417545 TAS2R8Q9NYW2 309 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 EHFQ9NZC4 300 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 ANXA10Q9UJ72 324 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 JPT1Q9UK76 154 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 AMMECR1Q9Y4X0 333 aaPredicted RBP6.95□□□□□ -1.3
TRIM48-201ENST00000417545 MALRD1Q5VYJ5 2156 aa6.95□□□□□ -1.3
TRIM48-201ENST00000417545 IGHV3OR16-10A0A075B7F0 116 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 ZNF736B4DX44 427 aaPredicted RBP6.94□□□□□ -1.3
TRIM48-201ENST00000417545 DIRAS3O95661 229 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 IGHV3-7P01780 117 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 ARG1P05089 322 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 SCTP09683 121 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 GSTT2P0CG29 244 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 PRTN3P24158 256 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 HLA-DMAP28067 261 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 FAUP35544 74 aaKnown RBP6.94□□□□□ -1.3
TRIM48-201ENST00000417545 HERV-K104P61576 105 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 HTD2P86397 168 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 PAX2Q02962 417 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 SSBP1Q04837 148 aaKnown RBP6.94□□□□□ -1.3
TRIM48-201ENST00000417545 KLRD1Q13241 179 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 CDK10Q15131 360 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 SRSF7Q16629 238 aaKnown RBP eCLIP6.94□□□□□ -1.3
TRIM48-201ENST00000417545 RNASE10Q5GAN6 216 aaKnown RBP6.94□□□□□ -1.3
TRIM48-201ENST00000417545 ZNF880Q6PDB4 577 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 ABHD12Q8N2K0 398 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 GDPD1Q8N9F7 314 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 OR2AK2Q8NG84 335 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 OR52L2PQ8NGH6 319 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 OR10X1Q8NGY0 326 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 ZNF596Q8TC21 504 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms