RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 NKX1-2Q9UD57 310 aaPredicted RBP11.95□□□□□ -0.5
UBXN4-203ENST00000416538 LINC00527Q9UJ94 153 aa11.95□□□□□ -0.5
UBXN4-203ENST00000416538 LSM2Q9Y333 95 aaKnown RBP11.95□□□□□ -0.5
UBXN4-203ENST00000416538 TCRBV4S1A1TA0A5B7 111 aa11.94□□□□□ -0.5
UBXN4-203ENST00000416538 LINC01548A6NM66 108 aa11.94□□□□□ -0.5
UBXN4-203ENST00000416538 ZNF736B4DX44 427 aaPredicted RBP11.94□□□□□ -0.5
UBXN4-203ENST00000416538 MYL12BO14950 172 aa11.94□□□□□ -0.5
UBXN4-203ENST00000416538 ZNF780AO75290 641 aaPredicted RBP11.94□□□□□ -0.5
UBXN4-203ENST00000416538 FAM106CPP0CH98 169 aa11.94□□□□□ -0.5
UBXN4-203ENST00000416538 IGLL1P15814 213 aa11.94□□□□□ -0.5
UBXN4-203ENST00000416538 MGMTP16455 207 aa11.94□□□□□ -0.5
UBXN4-203ENST00000416538 MED21Q13503 144 aa11.94□□□□□ -0.5
UBXN4-203ENST00000416538 HES1Q14469 280 aa11.94□□□□□ -0.5
UBXN4-203ENST00000416538 RAB12Q6IQ22 244 aa11.94□□□□□ -0.5
UBXN4-203ENST00000416538 SLC16A12Q6ZSM3 486 aa11.94□□□□□ -0.5
UBXN4-203ENST00000416538 IZUMO1Q8IYV9 350 aa11.94□□□□□ -0.5
UBXN4-203ENST00000416538 LINC00311Q8N616 119 aa11.94□□□□□ -0.5
UBXN4-203ENST00000416538 WFDC9Q8NEX5 89 aa11.94□□□□□ -0.5
UBXN4-203ENST00000416538 OR52M1Q8NGK5 317 aa11.94□□□□□ -0.5
UBXN4-203ENST00000416538 OR1L1Q8NH94 360 aa11.94□□□□□ -0.5
UBXN4-203ENST00000416538 TFAP2CQ92754 450 aa11.94□□□□□ -0.5
UBXN4-203ENST00000416538 S100A13Q99584 98 aa11.94□□□□□ -0.5
UBXN4-203ENST00000416538 TSSC4Q9Y5U2 329 aaPredicted RBP11.94□□□□□ -0.5
UBXN4-203ENST00000416538 M0QZK8 103 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 FGF16O43320 207 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 ORC5O43913 435 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 SC5DO75845 299 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 CD1AP06126 327 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 PF4V1P10720 104 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 RCC1P18754 421 aaPredicted RBP11.93□□□□□ -0.5
UBXN4-203ENST00000416538 ZNF134P52741 427 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 EBI3Q14213 229 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 GNMTQ14749 295 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 KHDC1LQ5JSQ8 128 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 SYT6Q5T7P8 510 aaPredicted RBP11.93□□□□□ -0.5
UBXN4-203ENST00000416538 FOXB2Q5VYV0 432 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 STX19Q8N4C7 294 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 OR4X2Q8NGF9 303 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 OR10V1Q8NGI7 309 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 NRG4Q8WWG1 115 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 FAM46BQ96A09 425 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 EAF1Q96JC9 268 aaPredicted RBP11.93□□□□□ -0.5
UBXN4-203ENST00000416538 SELENOIQ9C0D9 397 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 ETAA1Q9NY74 926 aa11.93□□□□□ -0.5
UBXN4-203ENST00000416538 PSMB11A5LHX3 300 aa11.92□□□□□ -0.5
UBXN4-203ENST00000416538 CCRL2O00421 344 aa11.92□□□□□ -0.5
UBXN4-203ENST00000416538 HBZP02008 142 aa11.92□□□□□ -0.5
UBXN4-203ENST00000416538 CDK1P06493 297 aa11.92□□□□□ -0.5
UBXN4-203ENST00000416538 GZMHP20718 246 aa11.92□□□□□ -0.5
UBXN4-203ENST00000416538 C6orf141Q5SZD1 244 aa11.92□□□□□ -0.5
UBXN4-203ENST00000416538 OR10K2Q6IF99 312 aa11.92□□□□□ -0.5
UBXN4-203ENST00000416538 SLC25A48Q6ZT89 311 aaKnown RBP11.92□□□□□ -0.5
UBXN4-203ENST00000416538 MOB3BQ86TA1 216 aa11.92□□□□□ -0.5
UBXN4-203ENST00000416538 LRRTM1Q86UE6 522 aa11.92□□□□□ -0.5
UBXN4-203ENST00000416538 C8orf31Q8N9H6 132 aa11.92□□□□□ -0.5
UBXN4-203ENST00000416538 RTN4IP1Q8WWV3 396 aaPredicted RBP11.92□□□□□ -0.5
UBXN4-203ENST00000416538 PEX16Q9Y5Y5 336 aa11.92□□□□□ -0.5
UBXN4-203ENST00000416538 UBE2QL1A1L167 161 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 H3BUI4 141 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 CRTAPO75718 401 aaPredicted RBP11.91□□□□□ -0.5
UBXN4-203ENST00000416538 IGHG2P01859 326 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 CD33P20138 364 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 ZNF137PP52743 207 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 AQP4P55087 323 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 GPR176Q14439 515 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 IRF3Q14653 427 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 CT45A1Q5HYN5 189 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 UNQ9370/PRO34162Q6UXP9 181 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 CDH26Q8IXH8 852 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 NKAIN3Q8N8D7 197 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 LINC00482Q8N8I6 264 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 Q8N9W7 124 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 CT45A3Q8NHU0 189 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 MRPL30Q8TCC3 161 aaKnown RBP11.91□□□□□ -0.5
UBXN4-203ENST00000416538 MRPS24Q96EL2 167 aaKnown RBP11.91□□□□□ -0.5
UBXN4-203ENST00000416538 SPACA1Q9HBV2 294 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 PLSCR3Q9NRY6 295 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 MBNL3Q9NUK0 354 aaKnown RBP11.91□□□□□ -0.5
UBXN4-203ENST00000416538 NECAP2Q9NVZ3 263 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 TRAPPC2LQ9UL33 140 aa11.91□□□□□ -0.5
UBXN4-203ENST00000416538 FAM90A10PA6NDY2 464 aa11.9□□□□□ -0.5
UBXN4-203ENST00000416538 FAM90A7PA6NKC0 464 aa11.9□□□□□ -0.5
UBXN4-203ENST00000416538 FAM90A23PA8MXZ1 464 aa11.9□□□□□ -0.5
UBXN4-203ENST00000416538 MCRIP1C9JLW8 97 aa11.9□□□□□ -0.5
UBXN4-203ENST00000416538 PF4P02776 101 aa11.9□□□□□ -0.5
UBXN4-203ENST00000416538 GAPDHP04406 335 aaKnown RBP11.9□□□□□ -0.5
UBXN4-203ENST00000416538 RPL23AP62750 156 aaKnown RBP11.9□□□□□ -0.5
UBXN4-203ENST00000416538 GABPB1Q06547 395 aaPredicted RBP11.9□□□□□ -0.5
UBXN4-203ENST00000416538 UNC119Q13432 240 aa11.9□□□□□ -0.5
UBXN4-203ENST00000416538 ACSM3Q53FZ2 586 aa11.9□□□□□ -0.5
UBXN4-203ENST00000416538 OR2W3Q7Z3T1 314 aa11.9□□□□□ -0.5
UBXN4-203ENST00000416538 PRR18Q8N4B5 295 aa11.9□□□□□ -0.5
UBXN4-203ENST00000416538 GFI1Q99684 422 aa11.9□□□□□ -0.5
UBXN4-203ENST00000416538 SULT4A1Q9BR01 284 aa11.9□□□□□ -0.5
UBXN4-203ENST00000416538 UQCC2Q9BRT2 126 aa11.9□□□□□ -0.5
UBXN4-203ENST00000416538 TMED9Q9BVK6 235 aa11.9□□□□□ -0.5
UBXN4-203ENST00000416538 SERPINE3A8MV23 424 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 PDCD6O75340 191 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 MPIG6BO95866 241 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 VSIG8P0DPA2 414 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms