RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 Q6P435 159 aa8.38□□□□□ -1.07
SS18-203ENST00000415083 ZNF600Q6ZNG1 722 aa8.38□□□□□ -1.07
SS18-203ENST00000415083 OR5D13Q8NGL4 314 aa8.38□□□□□ -1.07
SS18-203ENST00000415083 UBALD1Q8TB05 177 aa8.38□□□□□ -1.07
SS18-203ENST00000415083 KIAA1456Q9P272 454 aa8.38□□□□□ -1.07
SS18-203ENST00000415083 URB1O60287 2271 aaKnown RBP8.37□□□□□ -1.07
SS18-203ENST00000415083 GNMTQ14749 295 aa8.37□□□□□ -1.07
SS18-203ENST00000415083 NUFIP2Q7Z417 695 aaKnown RBP8.37□□□□□ -1.07
SS18-203ENST00000415083 H1FOOQ8IZA3 346 aaPredicted RBP8.37□□□□□ -1.07
SS18-203ENST00000415083 OR5P3Q8WZ94 311 aa8.37□□□□□ -1.07
SS18-203ENST00000415083 TOLLIPQ9H0E2 274 aa8.37□□□□□ -1.07
SS18-203ENST00000415083 ZNF703Q9H7S9 590 aaPredicted RBP8.37□□□□□ -1.07
SS18-203ENST00000415083 MRPS18CQ9Y3D5 142 aaKnown RBP8.37□□□□□ -1.07
SS18-203ENST00000415083 H0Y980 276 aa8.37□□□□□ -1.07
SS18-203ENST00000415083 HS3ST1O14792 307 aa8.37□□□□□ -1.07
SS18-203ENST00000415083 HOXA5P20719 270 aa8.37□□□□□ -1.07
SS18-203ENST00000415083 VDAC1P21796 283 aa8.37□□□□□ -1.07
SS18-203ENST00000415083 RAB2AP61019 212 aa8.37□□□□□ -1.07
SS18-203ENST00000415083 ZNF674Q2M3X9 581 aa8.37□□□□□ -1.07
SS18-203ENST00000415083 FAM185AQ8N0U4 392 aa8.37□□□□□ -1.07
SS18-203ENST00000415083 IL22RA1Q8N6P7 574 aa8.37□□□□□ -1.07
SS18-203ENST00000415083 C9J4A7 227 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.36□□□□□ -1.07
SS18-203ENST00000415083 IGKV1D-33P01593 117 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 IGKV1-33P01594 117 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 F2RP25116 425 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 SAXO1Q8IYX7 474 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 ZNF383Q8NA42 475 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 OR8G5Q8NG78 346 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 ABHD5Q8WTS1 349 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 GP6Q9HCN6 339 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 FAM186AA6NE01 2351 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 LOC102723971A0A1B0GUV8 181 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 PCBD1P61457 104 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 C4orf17Q53FE4 359 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 ZDHHC23Q8IYP9 409 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 RDH5Q92781 318 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 CPNE4Q96A23 557 aaPredicted RBP8.36□□□□□ -1.07
SS18-203ENST00000415083 ATP5SQ99766 215 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 LINC00470Q9BZP3 86 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 TMPRSS5Q9H3S3 457 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 RPRMQ9NS64 109 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 NOSIPQ9Y314 301 aaKnown RBP8.36□□□□□ -1.07
SS18-203ENST00000415083 TRBV6-6A0A0A6YYG2 114 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 HIST1H2BKO60814 126 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 HIST1H2BJP06899 126 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 SOD3P08294 240 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 HIST1H2BOP23527 126 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 HIST1H2BBP33778 126 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 TAGLN2P37802 199 aaKnown RBP8.36□□□□□ -1.07
SS18-203ENST00000415083 HIST1H2BDP58876 126 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 BRWD1-AS2P59051 145 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 TAS2R30P59541 319 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 HIST1H2BCP62807 126 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 HIST2H2BEQ16778 126 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 NRN1LQ496H8 165 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.36□□□□□ -1.07
SS18-203ENST00000415083 ZNF429Q86V71 674 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 HIST1H2BHQ93079 126 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 TECTBQ96PL2 329 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 HIST1H2BNQ99877 126 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 HIST1H2BMQ99879 126 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 CABLES2Q9BTV7 478 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 DLL3Q9NYJ7 618 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 OR14J1Q9UGF5 321 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 PRR14LQ5THK1 2151 aa8.36□□□□□ -1.07
SS18-203ENST00000415083 IFNA17P01571 189 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 SELEP16581 610 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 MDKP21741 143 aaPredicted RBP8.35□□□□□ -1.07
SS18-203ENST00000415083 MAGEA5P43359 124 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 ZNF266Q14584 549 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 LFNGQ8NES3 379 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 OR2M7Q8NG81 312 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 OR10D4PQ8NGN7 298 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 OR51H1Q8NH63 302 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 PBDC1Q9BVG4 233 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 OR51B6Q9H340 312 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 ZNF665Q9H7R5 613 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 DOK5Q9P104 306 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 PRSS50Q9UI38 385 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 ERRFI1Q9UJM3 462 aaPredicted RBP8.35□□□□□ -1.07
SS18-203ENST00000415083 IL18BPO95998 194 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 TK1P04183 234 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 CD55P08174 381 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 FGF8P55075 233 aaPredicted RBP8.35□□□□□ -1.07
SS18-203ENST00000415083 TLE1Q04724 770 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 TRA2AQ13595 282 aaKnown RBP eCLIP8.35□□□□□ -1.07
SS18-203ENST00000415083 MPV17LQ2QL34 196 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 TCEAL6Q6IPX3 200 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 VASH2Q86V25 355 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 ZNF525Q8N782 197 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 OR1K1Q8NGR3 316 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 CA5BP1Q8WTZ4 195 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 HLA-CQ95604 372 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 ABHD14BQ96IU4 210 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 TCEAL7Q9BRU2 100 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 A0A087WWC5 75 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 CD300LBA8K4G0 201 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 WRBO00258 174 aa8.35□□□□□ -1.07
SS18-203ENST00000415083 MRPL33O75394 65 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms