RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 MOB1BQ7L9L4 216 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 NOTCH2NLQ7Z3S9 236 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 PNKDQ8N490 385 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 FDCSPQ8NFU4 85 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 OR4F15Q8NGB8 312 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 OR52E2Q8NGJ4 325 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 FGGYQ96C11 551 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 ROPN1LQ96C74 230 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 COX14Q96I36 57 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 DPY30Q9C005 99 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 SPNS1Q9H2V7 528 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 PARLQ9H300 379 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 OR51B5Q9H339 312 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 TCEAL2Q9H3H9 227 aaPredicted RBP1.94□□□□□ -2.1
MCF2-204ENST00000414978 C1orf109Q9NX04 203 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 PSMD13Q9UNM6 376 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 SAMD4AQ9UPU9 718 aaKnown RBP1.94□□□□□ -2.1
MCF2-204ENST00000414978 POMPQ9Y244 141 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 POLR3HQ9Y535 204 aaPredicted RBP1.94□□□□□ -2.1
MCF2-204ENST00000414978 A0A1W2PP18 115 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 LYRM9A8MSI8 78 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 E7EQ34 232 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 H3BP45 60 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 SYNGR1O43759 233 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 CD5LO43866 347 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 PDYNP01213 254 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 HPNP05981 417 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 BCHEP06276 602 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 PGA5P0DJD9 388 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 ANOS1P23352 680 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 ZBTB25P24278 435 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 IMPA1P29218 277 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 DNASE1L1P49184 302 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 XKP51811 444 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 ZNF92Q03936 586 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 RAB31Q13636 194 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 TRAM1Q15629 374 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 CCSMST1Q4G0I0 132 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 DRAM2Q6UX65 266 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 S100A7AQ86SG5 101 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 LYG2Q86SG7 212 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 STPG2Q8N412 459 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 SVOPLQ8N434 492 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 OR10G6Q8NH81 332 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 ZFP3Q96NJ6 502 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 F2RL3Q96RI0 385 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 HOPXQ9BPY8 73 aaPredicted RBP1.94□□□□□ -2.1
MCF2-204ENST00000414978 ABCB9Q9NP78 766 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 C3orf18Q9UK00 162 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 FARSAQ9Y285 508 aaKnown RBP1.94□□□□□ -2.1
MCF2-204ENST00000414978 ZNF257Q9Y2Q1 563 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 DOCK10Q96BY6 2186 aa1.94□□□□□ -2.1
MCF2-204ENST00000414978 KRTAP9-6A0A140TA67 174 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 A0A1W2PRF3 423 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 A0A1W2PRM7 423 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 KRTAP9-7A8MTY7 169 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 H7C417 338 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 SOCS3O14543 225 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 KBTBD11O94819 623 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 IGKV1D-16P01601 117 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 GKN3PP0CG01 181 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 PGA4P0DJD7 388 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 PGA3P0DJD8 388 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 IGLL1P15814 213 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 CDK9P50750 372 aaKnown RBP1.93□□□□□ -2.1
MCF2-204ENST00000414978 TBPL1P62380 186 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 HERPUD1Q15011 391 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 DCST2Q5T1A1 773 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 OLFML2AQ68BL7 652 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 NIPAL1Q6NVV3 410 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 ADAM5Q6NVV9 412 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 MED27Q6P2C8 311 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 BAIAP2L2Q6UXY1 529 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 ZNF497Q6ZNH5 498 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 ARPINQ7Z6K5 226 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 PRSS58Q8IYP2 241 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 HS3ST5Q8IZT8 346 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 OR10R2Q8NGX6 335 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 PYDC1Q8WXC3 89 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 CDS1Q92903 461 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 LYZL4Q96KX0 146 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 EFCAB11Q9BUY7 163 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 TRIM15Q9C019 465 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 OR51V1Q9H2C8 321 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 MTFP1Q9UDX5 166 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 ZGRF1Q86YA3 2104 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 A0A087WYN8 130 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 A0A1W2PRD5 423 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 CDC40O60508 579 aaKnown RBP eCLIP1.93□□□□□ -2.1
MCF2-204ENST00000414978 TRAPPC6AO75865 159 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 GABARAPO95166 117 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 IL6P05231 212 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 OR8U9P0C7N5 309 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 C1GALT1C1LP0DN25 315 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 RAB4AP20338 218 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 S100A3P33764 101 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 CTRLP40313 264 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 MDH2P40926 338 aaKnown RBP1.93□□□□□ -2.1
MCF2-204ENST00000414978 YAP1P46937 504 aaKnown RBP1.93□□□□□ -2.1
MCF2-204ENST00000414978 CAPRIN1Q14444 709 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms