RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 RTP5Q14D33 572 aa10.34□□□□□ -0.75
PTPRF-205ENST00000414879 HAGHQ16775 308 aa10.34□□□□□ -0.75
PTPRF-205ENST00000414879 FFAR4Q5NUL3 377 aa10.34□□□□□ -0.75
PTPRF-205ENST00000414879 DHRS7BQ6IAN0 325 aaPredicted RBP10.34□□□□□ -0.75
PTPRF-205ENST00000414879 TXNL1O43396 289 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 THY1P04216 161 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 ZNF561Q8N587 486 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 ABHD14AQ9BUJ0 271 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 MANBALQ9NQG1 85 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 OPN4Q9UHM6 478 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 JPT1Q9UK76 154 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 NPIPB7O75200 414 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 KLF7O75840 302 aaPredicted RBP10.33□□□□□ -0.76
PTPRF-205ENST00000414879 HLA-DQB1P01920 261 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 DVL1P1P54792 670 aaPredicted RBP10.33□□□□□ -0.76
PTPRF-205ENST00000414879 NCR3LG1Q68D85 454 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 TMEM104Q8NE00 496 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 V9GYS6 101 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 ZNF729A6NN14 1252 aaPredicted RBP10.33□□□□□ -0.76
PTPRF-205ENST00000414879 CLN5O75503 358 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 OR2C1O95371 312 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 HLA-GP17693 338 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 CRYBA2P53672 197 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 TMEM65Q6PI78 240 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 Q96M66 194 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 TMEM231Q9H6L2 316 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 ZNF705FA8MVS1 300 aaPredicted RBP10.33□□□□□ -0.76
PTPRF-205ENST00000414879 TMEM14DPA8MWL7 114 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 H3BP45 60 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 ZNF705DP0CH99 300 aaPredicted RBP10.33□□□□□ -0.76
PTPRF-205ENST00000414879 ZNF705BP0CI00 300 aaPredicted RBP10.33□□□□□ -0.76
PTPRF-205ENST00000414879 RPUSD4Q96CM3 377 aaKnown RBP10.33□□□□□ -0.76
PTPRF-205ENST00000414879 LRFN3Q9BTN0 628 aa10.33□□□□□ -0.76
PTPRF-205ENST00000414879 WDR61Q9GZS3 305 aaKnown RBP10.33□□□□□ -0.76
PTPRF-205ENST00000414879 SS18L1O75177 396 aaPredicted RBP10.32□□□□□ -0.76
PTPRF-205ENST00000414879 H3F3AP84243 136 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 NAAAQ02083 359 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 SSX2Q16385 188 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 ITLN1Q8WWA0 313 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 ZNRF4Q8WWF5 429 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 C14orf79Q96F83 325 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 TECRQ9NZ01 308 aaKnown RBP10.32□□□□□ -0.76
PTPRF-205ENST00000414879 COL4A4P53420 1690 aaPredicted RBP10.32□□□□□ -0.76
PTPRF-205ENST00000414879 OR2H2O95918 312 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 ADRA2AP08913 450 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 APOBEC3AP31941 199 aaPredicted RBP10.32□□□□□ -0.76
PTPRF-205ENST00000414879 CDC34P49427 236 aaPredicted RBP10.32□□□□□ -0.76
PTPRF-205ENST00000414879 AARDQ4LEZ3 155 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 HARBI1Q96MB7 349 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 C1QTNF5Q9BXJ0 243 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 FBXL17Q9UF56 701 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 MPDU1O75352 247 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 EFNB2P52799 333 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 ZNF90Q03938 601 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 TNXAQ16473 311 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 ADAMTS17Q8TE56 1095 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 NEU4Q8WWR8 484 aaPredicted RBP10.32□□□□□ -0.76
PTPRF-205ENST00000414879 BCL2L2Q92843 193 aaPredicted RBP10.32□□□□□ -0.76
PTPRF-205ENST00000414879 MISP3Q96FF7 219 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 SMDT1Q9H4I9 107 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 SLC2A8Q9NY64 477 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 ZMIZ1Q9ULJ6 1067 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 ZNF785A8K8V0 405 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 RBP4P02753 201 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 TMEM123Q8N131 208 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 OR5P3Q8WZ94 311 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 KLK13Q9UKR3 277 aa10.32□□□□□ -0.76
PTPRF-205ENST00000414879 CCDC88CQ9P219 2028 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 MAP1LC3B2A6NCE7 125 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 SEMA7AO75326 666 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 RFPL3SP0C7P2 107 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 RAB4AP20338 218 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 M6PRP20645 277 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 TMEM33P57088 247 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 AESQ08117 197 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 GUK1Q16774 197 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 LGALSLQ3ZCW2 172 aaPredicted RBP10.31□□□□□ -0.76
PTPRF-205ENST00000414879 COX19Q49B96 90 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 ACSF3Q4G176 576 aaPredicted RBP10.31□□□□□ -0.76
PTPRF-205ENST00000414879 BAGE3Q86Y29 109 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 BAGE2Q86Y30 109 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 RFLNBQ8N5W9 214 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 WDYHV1Q96HA8 205 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 MAP1LC3BQ9GZQ8 125 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 LPAR2Q9HBW0 351 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 GPR132Q9UNW8 380 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 ZNF835Q9Y2P0 537 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 KCNK7Q9Y2U2 307 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 FAM24AA6NFZ4 105 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 RNASEK-C17orf49H0YIS7 233 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 PNRC1Q12796 327 aaPredicted RBP10.31□□□□□ -0.76
PTPRF-205ENST00000414879 SLC35E4Q6ICL7 350 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 ZNF645Q8N7E2 425 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 UBALD1Q8TB05 177 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 RXFP4Q8TDU9 374 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 MRPL13Q9BYD1 178 aaKnown RBP10.31□□□□□ -0.76
PTPRF-205ENST00000414879 ODAMA1E959 279 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 TSTD3H0UI37 97 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 IL18BPO95998 194 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 CALHM1Q8IU99 346 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms