RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 IGHV3OR16-8A0A075B7F1 116 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 SNURFLB1AK76 121 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 SOCS1O15524 211 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 MGAT2Q10469 447 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 LAMTOR1Q6IAA8 161 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 NT5CQ8TCD5 201 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 PGLYRP4Q96LB8 373 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 TLNRD1Q9H1K6 362 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 ARHGEF17Q96PE2 2063 aaPredicted RBP16.2■□□□□ 0.18
SHANK3-202ENST00000414786 PTOV1Q86YD1 416 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 TMEM191AQ9H0A3 160 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 GAPDHP04406 335 aaKnown RBP16.2■□□□□ 0.18
SHANK3-202ENST00000414786 OR2C3Q8N628 320 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 TP53I13Q8NBR0 393 aaPredicted RBP16.2■□□□□ 0.18
SHANK3-202ENST00000414786 NPFFR1Q9GZQ6 430 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 LINC01387J3KSC0 135 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 SRD5A2P31213 254 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 WDR73Q6P4I2 378 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 HDHD3Q9BSH5 251 aaPredicted RBP16.2■□□□□ 0.18
SHANK3-202ENST00000414786 PDCD6O75340 191 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 SUMO3P55854 103 aaPredicted RBP16.2■□□□□ 0.18
SHANK3-202ENST00000414786 MRGPRX3Q96LB0 322 aa16.2■□□□□ 0.18
SHANK3-202ENST00000414786 IGHV5-10-1A0A0J9YXX1 117 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 DIRC3C9JPN6 131 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 ZG16BQ96DA0 208 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 MUC21A0A0G2JKD1 596 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 MUC21A0A140T8X8 626 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 A0A1B0GUH1 482 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 TGIF1Q15583 401 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 MUC21Q5SSG8 566 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 SLC25A33Q9BSK2 321 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 DUSP21Q9H596 190 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 SF3B6Q9Y3B4 125 aaKnown RBP16.19■□□□□ 0.18
SHANK3-202ENST00000414786 SOX21Q9Y651 276 aaPredicted RBP16.19■□□□□ 0.18
SHANK3-202ENST00000414786 LGALS3P17931 250 aaKnown RBP16.19■□□□□ 0.18
SHANK3-202ENST00000414786 C3orf36Q3SXR2 165 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 OTOFQ9HC10 1997 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 TSPAN2O60636 221 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 GPX1P07203 203 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 EVX1P49640 407 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 PRSS27Q9BQR3 290 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 HSPB8Q9UJY1 196 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 DLL1O00548 723 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 CTLA4P16410 223 aa16.19■□□□□ 0.18
SHANK3-202ENST00000414786 GEMIN7Q9H840 131 aaKnown RBP16.19■□□□□ 0.18
SHANK3-202ENST00000414786 LCN2P80188 198 aa16.18■□□□□ 0.18
SHANK3-202ENST00000414786 TMEM167BQ9NRX6 74 aa16.18■□□□□ 0.18
SHANK3-202ENST00000414786 DNAJB12Q9NXW2 375 aaKnown RBP16.18■□□□□ 0.18
SHANK3-202ENST00000414786 ALX3O95076 343 aa16.18■□□□□ 0.18
SHANK3-202ENST00000414786 SFT2D2O95562 160 aa16.18■□□□□ 0.18
SHANK3-202ENST00000414786 PAXXQ9BUH6 204 aa16.18■□□□□ 0.18
SHANK3-202ENST00000414786 HRKO00198 91 aa16.18■□□□□ 0.18
SHANK3-202ENST00000414786 HSPB1P04792 205 aaKnown RBP16.18■□□□□ 0.18
SHANK3-202ENST00000414786 OR2V2Q96R30 315 aa16.18■□□□□ 0.18
SHANK3-202ENST00000414786 RASL10BQ96S79 203 aa16.18■□□□□ 0.18
SHANK3-202ENST00000414786 FLRT3Q9NZU0 649 aa16.18■□□□□ 0.18
SHANK3-202ENST00000414786 C7orf71A4D174 169 aa16.18■□□□□ 0.18
SHANK3-202ENST00000414786 CX3CL1P78423 397 aa16.18■□□□□ 0.18
SHANK3-202ENST00000414786 PRICKLE4Q2TBC4 344 aa16.18■□□□□ 0.18
SHANK3-202ENST00000414786 MS4A3Q96HJ5 214 aa16.18■□□□□ 0.18
SHANK3-202ENST00000414786 ZNF714Q96N38 554 aa16.18■□□□□ 0.18
SHANK3-202ENST00000414786 DXOO77932 396 aaKnown RBP16.18■□□□□ 0.18
SHANK3-202ENST00000414786 PCMT1P22061 227 aa16.18■□□□□ 0.18
SHANK3-202ENST00000414786 MFAP4P55083 255 aa16.18■□□□□ 0.18
SHANK3-202ENST00000414786 PGA3P0DJD8 388 aa16.17■□□□□ 0.18
SHANK3-202ENST00000414786 KHDC3LQ587J8 217 aa16.17■□□□□ 0.18
SHANK3-202ENST00000414786 PEAR1Q5VY43 1037 aaPredicted RBP16.17■□□□□ 0.18
SHANK3-202ENST00000414786 SAA1P0DJI8 122 aaPredicted RBP16.17■□□□□ 0.18
SHANK3-202ENST00000414786 SLC16A13Q7RTY0 426 aa16.17■□□□□ 0.18
SHANK3-202ENST00000414786 HIST1H4GQ99525 98 aa16.17■□□□□ 0.18
SHANK3-202ENST00000414786 MBD1Q9UIS9 605 aaPredicted RBP16.17■□□□□ 0.18
SHANK3-202ENST00000414786 SFTPCP11686 197 aa16.17■□□□□ 0.18
SHANK3-202ENST00000414786 WFDC12Q8WWY7 111 aa16.17■□□□□ 0.18
SHANK3-202ENST00000414786 FGF11Q92914 225 aa16.17■□□□□ 0.18
SHANK3-202ENST00000414786 IL36RNQ9UBH0 155 aa16.17■□□□□ 0.18
SHANK3-202ENST00000414786 CKS2P33552 79 aa16.17■□□□□ 0.18
SHANK3-202ENST00000414786 CLDN20P56880 219 aa16.17■□□□□ 0.18
SHANK3-202ENST00000414786 ZNF324BQ6AW86 544 aaPredicted RBP16.17■□□□□ 0.18
SHANK3-202ENST00000414786 ZNF826PQ6ZT77 177 aa16.17■□□□□ 0.18
SHANK3-202ENST00000414786 LHFPL5Q8TAF8 219 aa16.17■□□□□ 0.18
SHANK3-202ENST00000414786 ERVFRD-1P60508 538 aa16.17■□□□□ 0.18
SHANK3-202ENST00000414786 TMEM56-RWDD3S4R434 201 aa16.17■□□□□ 0.18
SHANK3-202ENST00000414786 CARFQ8N187 725 aa16.16■□□□□ 0.18
SHANK3-202ENST00000414786 ISL1P61371 349 aa16.16■□□□□ 0.18
SHANK3-202ENST00000414786 MRM1Q6IN84 353 aaKnown RBP16.16■□□□□ 0.18
SHANK3-202ENST00000414786 WNT5BQ9H1J7 359 aa16.16■□□□□ 0.18
SHANK3-202ENST00000414786 ASB10Q8WXI3 467 aa16.16■□□□□ 0.18
SHANK3-202ENST00000414786 SYNGR1O43759 233 aa16.16■□□□□ 0.18
SHANK3-202ENST00000414786 OR2A4O95047 310 aa16.16■□□□□ 0.18
SHANK3-202ENST00000414786 MBNL2Q5VZF2 373 aaKnown RBP16.16■□□□□ 0.18
SHANK3-202ENST00000414786 ZNF680Q8NEM1 530 aa16.16■□□□□ 0.18
SHANK3-202ENST00000414786 OR2A7Q96R45 310 aa16.16■□□□□ 0.18
SHANK3-202ENST00000414786 A0A1B0GTL3 188 aa16.16■□□□□ 0.18
SHANK3-202ENST00000414786 TMEM229AB2RXF0 380 aa16.16■□□□□ 0.18
SHANK3-202ENST00000414786 TDGF1P13385 188 aa16.16■□□□□ 0.18
SHANK3-202ENST00000414786 Q6ZNX1 250 aa16.16■□□□□ 0.18
SHANK3-202ENST00000414786 SYS1Q8N2H4 156 aa16.16■□□□□ 0.18
SHANK3-202ENST00000414786 RPS4Y2Q8TD47 263 aa16.16■□□□□ 0.18
SHANK3-202ENST00000414786 PIK3C2AO00443 1686 aa16.15■□□□□ 0.18
SHANK3-202ENST00000414786 ISG15P05161 165 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms