RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 MIOXQ9UGB7 285 aa13.06□□□□□ -0.32
SHMT2-202ENST00000414700 POLDIP2Q9Y2S7 368 aa13.06□□□□□ -0.32
SHMT2-202ENST00000414700 COLCA2A8K830 154 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 C1orf196B1AJZ1 125 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 WRBO00258 174 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 F12P00748 615 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-202ENST00000414700 IGHV2-70P01814 119 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 CD55P08174 381 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 EGR1P18146 543 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 TNFSF4P23510 183 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 TMEM50BP56557 158 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 MZT1Q08AG7 82 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 FAM201AQ5SY85 155 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 IL34Q6ZMJ4 242 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 TM2D1Q9BX74 207 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 SAP30LQ9HAJ7 183 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 CSMD1Q96PZ7 3565 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 TANC2Q9HCD6 1990 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 TRAV18A0A075B6X5 111 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 COX6B1P14854 86 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 RBM11P57052 281 aaKnown RBP13.05□□□□□ -0.32
SHMT2-202ENST00000414700 SSTP61278 116 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 FGF12P61328 243 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 RNF212Q495C1 297 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 PLAC9Q5JTB6 97 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 STEAP1BQ6NZ63 245 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 DTX2Q86UW9 622 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 FAM58AQ8N1B3 248 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 FAM89BQ8N5H3 189 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 GCSAMQ8N6F7 178 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 STOML3Q8TAV4 291 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 LRRC29Q8WV35 223 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 EMG1Q92979 244 aaKnown RBP13.05□□□□□ -0.32
SHMT2-202ENST00000414700 DIRC2Q96SL1 478 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 PLEKHF2Q9H8W4 249 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 DECR2Q9NUI1 292 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 UQCC1Q9NVA1 299 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 PPP1R3CQ9UQK1 317 aa13.05□□□□□ -0.32
SHMT2-202ENST00000414700 METTL21EPA6NDL7 271 aa13.04□□□□□ -0.32
SHMT2-202ENST00000414700 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-202ENST00000414700 LY6HO94772 140 aa13.04□□□□□ -0.32
SHMT2-202ENST00000414700 NXPH2O95156 264 aa13.04□□□□□ -0.32
SHMT2-202ENST00000414700 ZNF205O95201 554 aa13.04□□□□□ -0.32
SHMT2-202ENST00000414700 TFF1P04155 84 aa13.04□□□□□ -0.32
SHMT2-202ENST00000414700 FBP1P09467 338 aa13.04□□□□□ -0.32
SHMT2-202ENST00000414700 CD34P28906 385 aa13.04□□□□□ -0.32
SHMT2-202ENST00000414700 SRSF3P84103 164 aaKnown RBP13.04□□□□□ -0.32
SHMT2-202ENST00000414700 NKAPLQ5M9Q1 402 aa13.04□□□□□ -0.32
SHMT2-202ENST00000414700 BRICD5Q6PL45 260 aa13.04□□□□□ -0.32
SHMT2-202ENST00000414700 ZNF295-AS1Q8N0V1 137 aa13.04□□□□□ -0.32
SHMT2-202ENST00000414700 C15orf54Q8N8G6 183 aa13.04□□□□□ -0.32
SHMT2-202ENST00000414700 POC1AQ8NBT0 407 aa13.04□□□□□ -0.32
SHMT2-202ENST00000414700 SLC25A21Q9BQT8 299 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-202ENST00000414700 URM1Q9BTM9 101 aaKnown RBP13.04□□□□□ -0.32
SHMT2-202ENST00000414700 EGLN1Q9GZT9 426 aa13.04□□□□□ -0.32
SHMT2-202ENST00000414700 FN3KRPQ9HA64 309 aa13.04□□□□□ -0.32
SHMT2-202ENST00000414700 HES4Q9HCC6 221 aa13.04□□□□□ -0.32
SHMT2-202ENST00000414700 PLEKHA6Q9Y2H5 1048 aa13.04□□□□□ -0.32
SHMT2-202ENST00000414700 APCP25054 2843 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 FOXI3A8MTJ6 420 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-202ENST00000414700 NDUFS6O75380 124 aaKnown RBP13.03□□□□□ -0.32
SHMT2-202ENST00000414700 CYB5R3P00387 301 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-202ENST00000414700 CD3DP04234 171 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 GNB3P16520 340 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 CPT2P23786 658 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 NFYBP25208 207 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 GUCA2AQ02747 115 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 OR4A4PQ8NGN8 299 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 OR10R2Q8NGX6 335 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 ARHGAP5-AS1Q96IT6 56 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 SMCO4Q9NRQ5 59 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 METTL1Q9UBP6 276 aaKnown RBP13.03□□□□□ -0.32
SHMT2-202ENST00000414700 ARID1AO14497 2285 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 TPT1P13693 172 aaKnown RBP13.03□□□□□ -0.32
SHMT2-202ENST00000414700 TNFRSF1AP19438 455 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 GLRA1P23415 457 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 BLVRBP30043 206 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-202ENST00000414700 CDKN1AP38936 164 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 CEBPDP49716 269 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-202ENST00000414700 ACTBP60709 375 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 ACTG1P63261 375 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 ATXN7L3Q14CW9 347 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-202ENST00000414700 TESK1Q15569 626 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 INO80EQ8NBZ0 244 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-202ENST00000414700 CHST4Q8NCG5 386 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 RNF141Q8WVD5 230 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 EDARADDQ8WWZ3 215 aa13.03□□□□□ -0.32
SHMT2-202ENST00000414700 TMEM235A6NFC5 223 aa13.02□□□□□ -0.33
SHMT2-202ENST00000414700 SRRM5B3KS81 715 aa13.02□□□□□ -0.33
SHMT2-202ENST00000414700 LYNX1G3V0Z9 82 aa13.02□□□□□ -0.33
SHMT2-202ENST00000414700 OR7C1O76099 320 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-202ENST00000414700 LHBP01229 141 aa13.02□□□□□ -0.33
SHMT2-202ENST00000414700 LYNX1P0DP58 116 aa13.02□□□□□ -0.33
SHMT2-202ENST00000414700 PRSS3P35030 304 aa13.02□□□□□ -0.33
SHMT2-202ENST00000414700 PPOXP50336 477 aa13.02□□□□□ -0.33
SHMT2-202ENST00000414700 PJVKQ0ZLH3 352 aa13.02□□□□□ -0.33
SHMT2-202ENST00000414700 LRRC37A5PQ49AS3 106 aa13.02□□□□□ -0.33
SHMT2-202ENST00000414700 C6orf201Q7Z4U5 140 aa13.02□□□□□ -0.33
SHMT2-202ENST00000414700 TMED4Q7Z7H5 227 aa13.02□□□□□ -0.33
SHMT2-202ENST00000414700 LILRB2Q8N423 598 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms