RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 FBXW5Q969U6 566 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 SEH1LQ96EE3 360 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 C14orf79Q96F83 325 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 TMPRSS13Q9BYE2 586 aa7.37□□□□□ -1.23
SYNE1-211ENST00000413186 LYRM2Q9NU23 88 aaPredicted RBP7.37□□□□□ -1.23
SYNE1-211ENST00000413186 TMEM272A0A1B0GTI8 110 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 CDIPTO14735 213 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 ALX3O95076 343 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 CLDN14O95500 239 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 METTL15P1P0C7V9 234 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 HIST1H1DP16402 221 aaKnown RBP7.36□□□□□ -1.23
SYNE1-211ENST00000413186 MFAP4P55083 255 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 FLI1Q01543 452 aaPredicted RBP7.36□□□□□ -1.23
SYNE1-211ENST00000413186 LYG2Q86SG7 212 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 MOGAT3Q86VF5 341 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 DOLPP1Q86YN1 238 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 DVL3Q92997 716 aaPredicted RBP7.36□□□□□ -1.23
SYNE1-211ENST00000413186 ABHD1Q96SE0 405 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 S1PR3Q99500 378 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 TMEM208Q9BTX3 173 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 IFT22Q9H7X7 185 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 MSL2Q9HCI7 577 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 ZNF407Q9C0G0 2248 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 hADV38S2A0JD32 116 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 CYB5BO43169 146 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 MED6O75586 246 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 NGFP01138 241 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 PMP2P02689 132 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 FABP4P15090 132 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 GCSHP23434 173 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 KCNJ3P48549 501 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 ZNF79Q15937 498 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 ARV1Q9H2C2 271 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 PLEKHF2Q9H8W4 249 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 KLK11Q9UBX7 282 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 ZMIZ1Q9ULJ6 1067 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 ELOA3CA0A087WX78 387 aaPredicted RBP7.36□□□□□ -1.23
SYNE1-211ENST00000413186 IGKV1D-43A0A0B4J1Z2 117 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 B9A039 149 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 TM4SF5O14894 197 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 SYNGR3O43761 229 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 RANP62826 216 aaKnown RBP7.36□□□□□ -1.23
SYNE1-211ENST00000413186 UNQ9370/PRO34162Q6UXP9 181 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 ACOT7LQ6ZUV0 252 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 NAA40Q86UY6 237 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 GALMQ96C23 342 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 WFIKKN1Q96NZ8 548 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 PROK2Q9HC23 129 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 NPTNQ9Y639 398 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 SIRT4Q9Y6E7 314 aaPredicted RBP7.36□□□□□ -1.23
SYNE1-211ENST00000413186 PLXND1Q9Y4D7 1925 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 ESPL1Q14674 2120 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 TRAV8-7A0A075B6U6 113 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 OR4A8P0C604 315 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 CECR9P0C854 216 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 CD40P25942 277 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 DUSP1P28562 367 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 HIST3H3Q16695 136 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 LINC00303Q3SY05 128 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 OR4D10Q8NGI6 311 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 OR51A4Q8NGJ6 313 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 OR10AG1Q8NH19 301 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 KLF14Q8TD94 323 aaPredicted RBP7.36□□□□□ -1.23
SYNE1-211ENST00000413186 TAAR6Q96RI8 345 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 NKX6-2Q9C056 277 aaPredicted RBP7.36□□□□□ -1.23
SYNE1-211ENST00000413186 G6PC2Q9NQR9 355 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 FAM212BQ9NTI7 297 aaPredicted RBP7.36□□□□□ -1.23
SYNE1-211ENST00000413186 ZFHX3Q15911 3703 aa7.36□□□□□ -1.23
SYNE1-211ENST00000413186 RNASEK-C17orf49H0YIS7 233 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 ADAM20O43506 726 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 HLA-DQB1P01920 261 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 HOXB5P09067 269 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 HKR1P10072 659 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 DUTP33316 252 aaKnown RBP7.35□□□□□ -1.23
SYNE1-211ENST00000413186 PRSS12P56730 875 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 TESK1Q15569 626 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 TMEM128Q5BJH2 165 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 RNFT1Q5M7Z0 435 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 TOMM20LQ6UXN7 152 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 FBXW12Q6X9E4 464 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 C15orf54Q8N8G6 183 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 PXT1Q8NFP0 134 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 ERGIC1Q969X5 290 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 C1orf43Q9BWL3 253 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 ELF5Q9UKW6 265 aaPredicted RBP7.35□□□□□ -1.23
SYNE1-211ENST00000413186 NCBP2LA6PVI3 153 aaKnown RBP7.35□□□□□ -1.23
SYNE1-211ENST00000413186 FBXO24O75426 580 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 DKK1O94907 266 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 SSTR2P30874 369 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 G6PCP35575 357 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 CA7P43166 264 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 KIR2DL2P43627 348 aaPredicted RBP7.35□□□□□ -1.23
SYNE1-211ENST00000413186 MUC20Q8N307 709 aaPredicted RBP7.35□□□□□ -1.23
SYNE1-211ENST00000413186 OR5B3Q8NH48 314 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 CHAC2Q8WUX2 184 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 ST8SIA4Q92187 359 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 DDOQ99489 341 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 KLHDC3Q9BQ90 382 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 GAL3ST2Q9H3Q3 398 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 CACFD1Q9UGQ2 172 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms