RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 MMP25Q9NPA2 562 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 HSD17B6O14756 317 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 CNIH1O95406 144 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 FCGR3AP08637 254 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 GLI4P10075 376 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 LIMS1P48059 325 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 AADACL3Q5VUY0 350 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 OTPQ5XKR4 325 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 GFRALQ6UXV0 394 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 WFDC8Q8IUA0 241 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 FBXO34Q9NWN3 711 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 TET1Q8NFU7 2136 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 DICER1Q9UPY3 1922 aaKnown RBP7.47□□□□□ -1.21
PBRM1-209ENST00000412587 CACNA1EQ15878 2313 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 A0A1W2PPV9 198 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 IFITM10A6NMD0 228 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 GYPAP02724 150 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.47□□□□□ -1.21
PBRM1-209ENST00000412587 LYRM7Q5U5X0 104 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 VASH2Q86V25 355 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 OR8I2Q8N0Y5 310 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 H1FXQ92522 213 aaKnown RBP7.47□□□□□ -1.21
PBRM1-209ENST00000412587 ZNF764Q96H86 408 aaPredicted RBP7.47□□□□□ -1.21
PBRM1-209ENST00000412587 DNAJB12Q9NXW2 375 aaKnown RBP7.47□□□□□ -1.21
PBRM1-209ENST00000412587 ZNF835Q9Y2P0 537 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 ATP23Q9Y6H3 246 aa7.47□□□□□ -1.21
PBRM1-209ENST00000412587 NXPH3O95157 252 aa7.46□□□□□ -1.21
PBRM1-209ENST00000412587 CEACAM1P13688 526 aa7.46□□□□□ -1.21
PBRM1-209ENST00000412587 FCER1GP30273 86 aa7.46□□□□□ -1.21
PBRM1-209ENST00000412587 EDDM3AQ14507 147 aa7.46□□□□□ -1.21
PBRM1-209ENST00000412587 FAM219AQ8IW50 185 aa7.46□□□□□ -1.21
PBRM1-209ENST00000412587 BLNKQ8WV28 456 aa7.46□□□□□ -1.21
PBRM1-209ENST00000412587 SLC22A13Q9Y226 551 aa7.46□□□□□ -1.21
PBRM1-209ENST00000412587 SIGLEC7Q9Y286 467 aa7.46□□□□□ -1.21
PBRM1-209ENST00000412587 SNURFLB1AK76 121 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 EFSO43281 561 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 CA11O75493 328 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 DEDDO75618 318 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 FGF8P55075 233 aaPredicted RBP7.46□□□□□ -1.22
PBRM1-209ENST00000412587 ZNF506Q5JVG8 444 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 SELENOHQ8IZQ5 122 aaKnown RBP7.46□□□□□ -1.22
PBRM1-209ENST00000412587 CT55Q8WUE5 264 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 ST6GALNAC2Q9UJ37 374 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 TDRD15B5MCY1 1934 aaKnown RBP7.46□□□□□ -1.22
PBRM1-209ENST00000412587 DEGS1O15121 323 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 MC5RP33032 325 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 LCN2P80188 198 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 EWSR1Q01844 656 aaKnown RBP eCLIP7.46□□□□□ -1.22
PBRM1-209ENST00000412587 BOD1Q96IK1 185 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 HSPB8Q9UJY1 196 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 POLDIP2Q9Y2S7 368 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 R4GMQ9 66 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 WDR90Q96KV7 1748 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 A0A1B0GTI1 187 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 DPRXA6NFQ7 191 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 MT-ND6P03923 174 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 CXCL1P09341 107 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 CDKN2AP42771 156 aaKnown RBP7.46□□□□□ -1.22
PBRM1-209ENST00000412587 GVQW1Q8N7I0 195 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 SGMS2Q8NHU3 365 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 PSMG3Q9BT73 122 aaPredicted RBP7.46□□□□□ -1.22
PBRM1-209ENST00000412587 UBTD1Q9HAC8 227 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 COX11Q9Y6N1 276 aa7.46□□□□□ -1.22
PBRM1-209ENST00000412587 TRBV24-1A0A075B6N3 115 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 IGHV5-10-1A0A0J9YXX1 117 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 TMEM238LA0A1B0GVL6 79 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 SPAARA0A1B0GVQ0 90 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 FAM221AA4D161 298 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 ZNF732B4DXR9 585 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 WISP3O95389 354 aaPredicted RBP7.45□□□□□ -1.22
PBRM1-209ENST00000412587 SRP19P09132 144 aaKnown RBP7.45□□□□□ -1.22
PBRM1-209ENST00000412587 MDH2P40926 338 aaKnown RBP7.45□□□□□ -1.22
PBRM1-209ENST00000412587 MEOX1P50221 254 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 UCP3P55916 312 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 ZNF141Q15928 474 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 BIVMQ86UB2 503 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 SFTPA2Q8IWL1 248 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 NOXO1Q8NFA2 376 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 KISS1RQ969F8 398 aaPredicted RBP7.45□□□□□ -1.22
PBRM1-209ENST00000412587 FOXB1Q99853 325 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 PECRQ9BY49 303 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 CSTL1Q9H114 145 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 SLC2A8Q9NY64 477 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 OR51B2Q9Y5P1 312 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 PARP14Q460N5 1801 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 SPINT2O43291 252 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 ONECUT2O95948 504 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 HIST1H1EP10412 219 aaKnown RBP7.45□□□□□ -1.22
PBRM1-209ENST00000412587 HTR1DP28221 377 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 ZNF718Q3SXZ3 478 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 CBLN3Q6UW01 205 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 BATF2Q8N1L9 274 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 PNKDQ8N490 385 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 MRPL30Q8TCC3 161 aaKnown RBP7.45□□□□□ -1.22
PBRM1-209ENST00000412587 SFRP2Q96HF1 295 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 BARX1Q9HBU1 254 aaPredicted RBP7.45□□□□□ -1.22
PBRM1-209ENST00000412587 CISD1Q9NZ45 108 aaKnown RBP7.45□□□□□ -1.22
PBRM1-209ENST00000412587 IGHV3-64DA0A0J9YX35 117 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 M0R1B8 84 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 ARPC3O15145 178 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms