RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 PLXNA2O75051 1894 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 TNRC6AQ8NDV7 1962 aaKnown RBP4.49□□□□□ -1.69
HERC4-205ENST00000412272 SHISA7A6NL88 538 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 CCDC179H3BU77 68 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 SLC16A7O60669 478 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 ZGLP1P0C6A0 271 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 ZNF17P17021 662 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 PRSS3P35030 304 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 LCN2P80188 198 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 ATP5G2Q06055 141 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 ZNF506Q5JVG8 444 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 FFAR4Q5NUL3 377 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 DCAF12Q5T6F0 453 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 ZNF474Q6S9Z5 364 aaPredicted RBP4.49□□□□□ -1.69
HERC4-205ENST00000412272 LCN15Q6UWW0 184 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 STAC2Q6ZMT1 411 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 MDGA2Q7Z553 956 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 TMEM86AQ8N2M4 240 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 CISD2Q8N5K1 135 aaKnown RBP4.49□□□□□ -1.69
HERC4-205ENST00000412272 OR5AU1Q8NGC0 362 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 ZNF563Q8TA94 476 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 EID2BQ96D98 161 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 AMELYQ99218 206 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 NAT8BQ9UHF3 227 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 A0A0G2JLM5 398 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 KIR2DS5A0A0G2JLQ3 304 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 A0A0G2JNG1 304 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 CLEC3AO75596 197 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 CER1O95813 267 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 HPNP05981 417 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 C8orf89P0DMQ9 161 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 KIR2DS5Q14953 304 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 FAM90A2PQ658T7 463 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 C17orf99Q6UX52 265 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 OSR2Q8N2R0 312 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 OR8B12Q8NGG6 310 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 GPER1Q99527 375 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 MED29Q9NX70 200 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 TAAR3PQ9P1P4 343 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 AK3Q9UIJ7 227 aa4.49□□□□□ -1.69
HERC4-205ENST00000412272 K7N7A8 449 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 M0R1X1 148 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 CYBAP13498 195 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 GATA2P23769 480 aaPredicted RBP4.48□□□□□ -1.69
HERC4-205ENST00000412272 RPS12P25398 132 aaKnown RBP4.48□□□□□ -1.69
HERC4-205ENST00000412272 OPRM1P35372 400 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 TUSC3Q13454 348 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 PPP1R1AQ13522 171 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 CD226Q15762 336 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 TMEM215Q68D42 235 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 FAM219AQ8IW50 185 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 SHISA5Q8N114 240 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 CA13Q8N1Q1 262 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 ADOQ96SZ5 270 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 S1PR5Q9H228 398 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 TXNIPQ9H3M7 391 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 SDF2L1Q9HCN8 221 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 NRN1Q9NPD7 142 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 SIGLEC9Q9Y336 463 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 WASHC3Q9Y3C0 194 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 NCKAP5O14513 1909 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 K7ESF4 209 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 HLA-HP01893 362 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 TTRP02766 147 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 SPINK8P0C7L1 97 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 IL9P15248 144 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 NPY1RP25929 384 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 ACRV1P26436 265 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 FXYD6P3P58550 94 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 RPL24P83731 157 aaKnown RBP4.48□□□□□ -1.69
HERC4-205ENST00000412272 SPEM2Q0P670 501 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 TCEAL5Q5H9L2 206 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 UTF1Q5T230 341 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 TMEM184AQ6ZMB5 413 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 ASCL5Q7RTU5 278 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 OR9G4Q8NGQ1 327 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 MRAPQ8TCY5 172 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 C2orf50Q96LR7 162 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 GPR174Q9BXC1 333 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 TP73-AS1Q9UF72 201 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 LINC00312Q9Y6C7 94 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 IGLV3-16A0A075B6K0 115 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 CENPVL3A0A0U1RRI6 287 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 NUDT3O95989 172 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 LINC00869P0C866 280 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 GLRXP35754 106 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 CCR2P41597 374 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 NPBWR2P48146 333 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 PRSS53Q2L4Q9 553 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 TMEM173Q86WV6 379 aaPredicted RBP4.48□□□□□ -1.69
HERC4-205ENST00000412272 CLDN19Q8N6F1 224 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 OR5A1Q8NGJ0 315 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 C2orf15Q8WU43 125 aaKnown RBP4.48□□□□□ -1.69
HERC4-205ENST00000412272 CT55Q8WUE5 264 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 ST8SIA1Q92185 356 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 DNAJC30Q96LL9 226 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 SPAG8Q99932 426 aaPredicted RBP4.48□□□□□ -1.69
HERC4-205ENST00000412272 TMEM133Q9H2Q1 129 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 CDIP1Q9H305 208 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 SPANXB1Q9NS25 103 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms