RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 KRTAP21-3Q3LHN1 58 aa12.54□□□□□ -0.4
TRAPPC12-203ENST00000411973 OLFML2AQ68BL7 652 aa12.54□□□□□ -0.4
TRAPPC12-203ENST00000411973 Q6YL49 198 aa12.54□□□□□ -0.4
TRAPPC12-203ENST00000411973 Q6ZPA2 131 aa12.54□□□□□ -0.4
TRAPPC12-203ENST00000411973 MOB1BQ7L9L4 216 aa12.54□□□□□ -0.4
TRAPPC12-203ENST00000411973 LDLRAD3Q86YD5 345 aa12.54□□□□□ -0.4
TRAPPC12-203ENST00000411973 CMSS1Q9BQ75 279 aaKnown RBP12.54□□□□□ -0.4
TRAPPC12-203ENST00000411973 ABCG5Q9H222 651 aa12.54□□□□□ -0.4
TRAPPC12-203ENST00000411973 TAF9BQ9HBM6 251 aa12.54□□□□□ -0.4
TRAPPC12-203ENST00000411973 ZNF286AQ9HBT8 521 aa12.54□□□□□ -0.4
TRAPPC12-203ENST00000411973 FAM96BQ9Y3D0 163 aa12.54□□□□□ -0.4
TRAPPC12-203ENST00000411973 CLDN34H7C241 214 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 VENTXO95231 258 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 HBZP02008 142 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 LOXL3P58215 753 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 HMGN3Q15651 99 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 Q3ZCU0 254 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 UTF1Q5T230 341 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 MINOS1Q5TGZ0 78 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 ZDHHC22Q8N966 263 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 BEND2Q8NDZ0 799 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 OR9G1Q8NH87 305 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 ZNF596Q8TC21 504 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 ACOT12Q8WYK0 555 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 ZDHHC16Q969W1 377 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 MALSU1Q96EH3 234 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 HDHD3Q9BSH5 251 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 MEGF9Q9H1U4 602 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 CHMP1AQ9HD42 196 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 ESM1Q9NQ30 184 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 GFOD1Q9NXC2 390 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 MGAT4AQ9UM21 535 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 MINOS1-NBL1R4GNA1 71 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 COL6A5A8TX70 2615 aa12.53□□□□□ -0.4
TRAPPC12-203ENST00000411973 MELTFP08582 738 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 GSTP1P09211 210 aaKnown RBP12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 CD3GP09693 182 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 PRRX1P54821 245 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 HTD2P86397 168 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 BAMBIQ13145 260 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 SPCS2Q15005 226 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 ZNF260Q3ZCT1 412 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 CDNFQ49AH0 187 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 UBE2NLQ5JXB2 153 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 LDLRAD2Q5SZI1 272 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 LHFPL4Q7Z7J7 247 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 TMEM86BQ8N661 226 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 C8orf31Q8N9H6 132 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 OR4P4Q8NGL7 312 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 OR1L1Q8NH94 360 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 UBALD1Q8TB05 177 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 ZFAND2BQ8WV99 257 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 C17orf50Q8WW18 174 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 CMTM3Q96MX0 182 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 Q9N2K0 584 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 ZNRD1Q9P1U0 126 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 PSG11Q9UQ72 335 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 CEPT1Q9Y6K0 416 aa12.52□□□□□ -0.41
TRAPPC12-203ENST00000411973 A0A075B6Q4 140 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 FAM172BPA6NC97 362 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 H3BMQ9 156 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 J3QR06 171 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 SDCBPO00560 298 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 TOR1AO14656 332 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 ZNF182P17025 639 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 HTR1DP28221 377 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 MRPS15P82914 257 aaKnown RBP12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 AANATQ16613 207 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 LTC4SQ16873 150 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 PNLIPRP3Q17RR3 467 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 HLA-DRB5Q30154 266 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 HACD4Q5VWC8 232 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 PRR18Q8N4B5 295 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 SAMD12Q8N8I0 201 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 SSMEM1Q8WWF3 244 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 AP3S1Q92572 193 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 CREB3L1Q96BA8 519 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 PHF21AQ96BD5 680 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 ISOC1Q96CN7 298 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 S100A16Q96FQ6 103 aaKnown RBP12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 MMP28Q9H239 520 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 ZMAT3Q9HA38 289 aaKnown RBP12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 DIABLOQ9NR28 239 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 POMT1Q9Y6A1 747 aa12.51□□□□□ -0.41
TRAPPC12-203ENST00000411973 DNAJC9-AS1A6NH13 148 aa12.5□□□□□ -0.41
TRAPPC12-203ENST00000411973 BUB1B-PAK6H3BSN5 160 aa12.5□□□□□ -0.41
TRAPPC12-203ENST00000411973 HOXA3O43365 443 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC12-203ENST00000411973 NOL3O60936 208 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-203ENST00000411973 FCGR3AP08637 254 aa12.5□□□□□ -0.41
TRAPPC12-203ENST00000411973 IER3P46695 156 aa12.5□□□□□ -0.41
TRAPPC12-203ENST00000411973 UBA52P62987 128 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-203ENST00000411973 SLC9A3R2Q15599 337 aa12.5□□□□□ -0.41
TRAPPC12-203ENST00000411973 SRSF7Q16629 238 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRAPPC12-203ENST00000411973 LINC00311Q8N616 119 aa12.5□□□□□ -0.41
TRAPPC12-203ENST00000411973 SETD6Q8TBK2 473 aa12.5□□□□□ -0.41
TRAPPC12-203ENST00000411973 LEAP2Q969E1 77 aa12.5□□□□□ -0.41
TRAPPC12-203ENST00000411973 GALMQ96C23 342 aa12.5□□□□□ -0.41
TRAPPC12-203ENST00000411973 DPM3Q9P2X0 92 aa12.5□□□□□ -0.41
TRAPPC12-203ENST00000411973 JPT1Q9UK76 154 aa12.5□□□□□ -0.41
TRAPPC12-203ENST00000411973 TRAV18A0A075B6X5 111 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms