RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 BATF3Q9NR55 127 aa-2.38□□□□□ -2.79
RNU4-88P-201ENST00000411220 GPR173Q9NS66 373 aa-2.38□□□□□ -2.79
RNU4-88P-201ENST00000411220 HAUS2Q9NVX0 235 aa-2.38□□□□□ -2.79
RNU4-88P-201ENST00000411220 PAK1IP1Q9NWT1 392 aaPredicted RBP-2.38□□□□□ -2.79
RNU4-88P-201ENST00000411220 TECRQ9NZ01 308 aaKnown RBP-2.38□□□□□ -2.79
RNU4-88P-201ENST00000411220 XCL2Q9UBD3 114 aa-2.38□□□□□ -2.79
RNU4-88P-201ENST00000411220 TIMM9Q9Y5J7 89 aa-2.38□□□□□ -2.79
RNU4-88P-201ENST00000411220 CLIC4Q9Y696 253 aa-2.38□□□□□ -2.79
RNU4-88P-201ENST00000411220 PXMP4Q9Y6I8 212 aa-2.38□□□□□ -2.79
RNU4-88P-201ENST00000411220 PBRM1Q86U86 1689 aa-2.38□□□□□ -2.79
RNU4-88P-201ENST00000411220 ZNF608Q9ULD9 1512 aaPredicted RBP-2.38□□□□□ -2.79
RNU4-88P-201ENST00000411220 USP47Q96K76 1375 aa-2.38□□□□□ -2.79
RNU4-88P-201ENST00000411220 MED1Q15648 1581 aaPredicted RBP-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 ATRNO75882 1429 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 LOC102723996A0A087X1L8 192 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 TRBV9A0A0B4J1U6 114 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 IGHV3OR16-9A0A0B4J2B5 98 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 NBDYA0A0U1RRE5 68 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 FAM236DA0A1B0GTK5 79 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 A0A1W2PNV4 684 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 A0A1W2PQD3 144 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR6C6A6NF89 314 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 MEI4A8MW99 385 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 TMEM14DPA8MWL7 114 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 C9J4A7 227 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 C9JAW5 83 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 F8W1H4 67 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 M0R2P5 195 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 SEPT4O43236 478 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 DHHO43323 396 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 DENRO43583 198 aaKnown RBP-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 LYZL6O75951 148 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 ANXA9O76027 345 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 EPPINO95925 133 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 SERPIND1P05546 499 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 CHRNGP07510 517 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 SEC11BP0C7V7 166 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 FAM236CP0DP71 79 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 TCN1P20061 433 aaPredicted RBP-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 CD24P25063 80 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 TEAD1P28347 426 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 CRATP43155 626 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 CAPZA2P47755 286 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 INSL3P51460 131 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 MRPL12P52815 198 aaKnown RBP-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 BIDP55957 195 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 YPEL3P61236 119 aaPredicted RBP-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 MC1RQ01726 317 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 PDZK1IP1Q13113 114 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 APOFQ13790 326 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 MMDQ15546 238 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 TAF1AQ15573 450 aaPredicted RBP-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 PARP15Q460N3 678 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 LCN8Q6JVE9 175 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 KRT80Q6KB66 452 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 CD200R1LQ6Q8B3 271 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 C2orf82Q6UX34 121 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 ANGPTL8Q6UXH0 198 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 ANKRD33Q7Z3H0 272 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 C16orf62Q7Z3J2 963 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 COX8CQ7Z4L0 72 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 AKAP14Q86UN6 197 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 RANBP3LQ86VV4 465 aaPredicted RBP-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 TEN1Q86WV5 123 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 GRAMD1CQ8IYS0 662 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 LINC00269Q8N2A0 174 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 ZADH2Q8N4Q0 377 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR8A1Q8NGG7 326 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR2A1Q8NGT9 310 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR11L1Q8NGX0 322 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR52J3Q8NH60 311 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 WDR36Q8NI36 951 aaKnown RBP-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 TRUB1Q8WWH5 349 aaKnown RBP-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 TMEM37Q8WXS4 190 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 PTP4A1Q93096 173 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 MRPL24Q96A35 216 aaKnown RBP-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 DTD2Q96FN9 168 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 DMAC1Q96GE9 116 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 SUCLG2Q96I99 432 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 CAPNS2Q96L46 248 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 C2orf50Q96LR7 162 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 GSDMAQ96QA5 445 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 THTPAQ9BU02 230 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 TRIM62Q9BVG3 475 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 FNDC11Q9BVV2 318 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 HINT2Q9BX68 163 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 GBA3Q9H227 469 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 PPA2Q9H2U2 334 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 TUBG2Q9NRH3 451 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 CDC42SE2Q9NRR3 84 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 PHPT1Q9NRX4 125 aaPredicted RBP-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 FAM114A2Q9NRY5 505 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 C20orf141Q9NUB4 165 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 NKIRAS2Q9NYR9 191 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 IL36BQ9NZH7 164 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 CHRNA9Q9UGM1 479 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR52A1Q9UKL2 312 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 PNMA2Q9UL42 364 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 NFU1Q9UMS0 254 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 SLC9A8Q9Y2E8 581 aa-2.39□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms