RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 BBS1Q8NFJ9 593 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 NPBQ8NG41 125 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 OR10G2Q8NGC3 310 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 OR5D18Q8NGL1 313 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 OR2K2Q8NGT1 345 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 OR2T29Q8NH02 315 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 CNIH3Q8TBE1 160 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 GIPC3Q8TF64 312 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 ABHD5Q8WTS1 349 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 CASTOR1Q8WTX7 329 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 PHLDA1Q8WV24 401 aaPredicted RBP1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 ARL11Q969Q4 196 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 UTP4Q969X6 686 aaKnown RBP1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 RFT1Q96AA3 541 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 ADAT3Q96EY9 351 aaPredicted RBP1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 ATP6V1G3Q96LB4 118 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 OPALINQ96PE5 141 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 MS4A10Q96PG2 267 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 SPACA5Q96QH8 159 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 NR1H4Q96RI1 486 aaPredicted RBP1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 CNN2Q99439 309 aaKnown RBP1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 FEVQ99581 238 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 APOL4Q9BPW4 351 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 NIPSNAP1Q9BPW8 284 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 OVOL2Q9BRP0 275 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 GGTLC1Q9BX51 225 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 TTTY10Q9BZA0 68 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 NEK6Q9HC98 313 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 RAB9BQ9NP90 201 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 ZNF355PQ9NSJ1 428 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 GFOD1Q9NXC2 390 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 PLA2G2EQ9NZK7 142 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 H2AFY2Q9P0M6 372 aaPredicted RBP1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 PEMTQ9UBM1 199 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 SLC23A1Q9UHI7 598 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 DHDHQ9UQ10 334 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 FBXO7Q9Y3I1 522 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 SAMHD1Q9Y3Z3 626 aaKnown RBP1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 NUBP2Q9Y5Y2 271 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 A3GALT2U3KPV4 340 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 VPS13DQ5THJ4 4388 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 HERC1Q15751 4861 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 LOC102724200A0A096LPH7 203 aaPredicted RBP1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 IGHV3-43A0A0B4J1X8 118 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 A0A0B4J203 849 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 A0A1B0GVY2 172 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 LOC107986453A0A1B0GWG9 222 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 TMEM30CPA0ZSE6 113 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 ANKRD34BA5PLL1 514 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 IZUMO1RA6ND01 250 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 CCDC182A6NF36 153 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 METTL15A6NJ78 407 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 ZNF785A8K8V0 405 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 HMGB1P1B2RPK0 211 aaPredicted RBP1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 C15orf65H3BRN8 121 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 H3BUA1 57 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 AIPO00170 330 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 RRHO14718 337 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 ARPC2O15144 300 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 SLC31A2O15432 143 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 SPINT2O43291 252 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 SPRY2O43597 315 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 AIREO43918 545 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 MITFO75030 526 aaPredicted RBP1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 SULT1C4O75897 302 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 OR7C1O76099 320 aaPredicted RBP1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 OR2A4O95047 310 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 MT-ND2P03891 347 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 IFNA4P05014 189 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 UBCP0CG48 685 aaKnown RBP1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 IGHV3-43DP0DP04 118 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 EGR2P11161 476 aaPredicted RBP1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 OSMP13725 252 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 ANXA8P13928 327 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 HSD17B1P14061 328 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 AADACP22760 399 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 MECP2P51608 486 aaKnown RBP1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 MNAT1P51948 309 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 ZNF134P52741 427 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 PRR20EP86478 221 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 PRR20CP86479 221 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 PRR20DP86480 221 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 PRR20BP86481 221 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 PRR20AP86496 221 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 CDK5Q00535 292 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 NDPQ00604 133 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 EWSR1Q01844 656 aaKnown RBP eCLIP1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 ZNF45Q02386 682 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 IL13RA2Q14627 380 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 PLGLAQ15195 96 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 KISS1Q15726 138 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 GUCA2BQ16661 112 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 ANKRD55Q3KP44 614 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 TMEM30BQ3MIR4 351 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 CD300EQ496F6 205 aaPredicted RBP1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 CT45A1Q5HYN5 189 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 ELP2Q6IA86 826 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 ZNF562Q6V9R5 426 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 TMEM179BQ7Z7N9 219 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 PPP1R27Q86WC6 154 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms