RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 PTAFRP25105 342 aa13.49□□□□□ -0.25
HOXD3-202ENST00000410016 SPATA46Q5T0L3 261 aa13.49□□□□□ -0.25
HOXD3-202ENST00000410016 OR8G5Q8NG78 346 aa13.49□□□□□ -0.25
HOXD3-202ENST00000410016 SFT2D1Q8WV19 159 aa13.49□□□□□ -0.25
HOXD3-202ENST00000410016 WDYHV1Q96HA8 205 aa13.49□□□□□ -0.25
HOXD3-202ENST00000410016 NCOR1O75376 2440 aa13.48□□□□□ -0.25
HOXD3-202ENST00000410016 NPIPB11E5RHQ5 1161 aa13.48□□□□□ -0.25
HOXD3-202ENST00000410016 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.48□□□□□ -0.25
HOXD3-202ENST00000410016 DEGS1O15121 323 aa13.48□□□□□ -0.25
HOXD3-202ENST00000410016 OR13C7P0DN81 318 aa13.48□□□□□ -0.25
HOXD3-202ENST00000410016 CEACAM1P13688 526 aa13.48□□□□□ -0.25
HOXD3-202ENST00000410016 SSTP61278 116 aa13.48□□□□□ -0.25
HOXD3-202ENST00000410016 ZNF154Q13106 437 aa13.48□□□□□ -0.25
HOXD3-202ENST00000410016 TGIF1Q15583 401 aa13.48□□□□□ -0.25
HOXD3-202ENST00000410016 Q6ZRM9 215 aa13.48□□□□□ -0.25
HOXD3-202ENST00000410016 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.48□□□□□ -0.25
HOXD3-202ENST00000410016 WDR86Q86TI4 376 aa13.48□□□□□ -0.25
HOXD3-202ENST00000410016 OR1A1Q9P1Q5 309 aa13.48□□□□□ -0.25
HOXD3-202ENST00000410016 J3QT63 122 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 PSG2P11465 335 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 SLC25A6P12236 298 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 RUNX1Q01196 453 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 TESK1Q15569 626 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 RNFT1Q5M7Z0 435 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 MYPOPQ86VE0 399 aaPredicted RBP13.47□□□□□ -0.25
HOXD3-202ENST00000410016 DEFB123Q8N688 67 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 OR1J1Q8NGS3 322 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 OR51H1Q8NH63 302 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 SNIP1Q8TAD8 396 aaKnown RBP13.47□□□□□ -0.25
HOXD3-202ENST00000410016 DEFB127Q9H1M4 99 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 HIPK2Q9H2X6 1198 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 R4GN57 208 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 A0A1B0GU03 582 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 RBFOX3A6NFN3 312 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 IGKV1-39P01597 117 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 IGKV1D-39P04432 117 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 AGAP20933 346 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 RAB5BP61020 215 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 ERVK11-1P61568 191 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 RHEBQ15382 184 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 VASH2Q86V25 355 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 CD300LFQ8TDQ1 290 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 GNPNAT1Q96EK6 184 aaPredicted RBP13.47□□□□□ -0.25
HOXD3-202ENST00000410016 TREM2Q9NZC2 230 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 SPRR3Q9UBC9 169 aa13.47□□□□□ -0.25
HOXD3-202ENST00000410016 ARHGAP21Q5T5U3 1957 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 TRAV39A0A0B4J263 110 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 SULT1A1P50225 295 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 OR8G1Q15617 311 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 IZUMO4Q1ZYL8 232 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 PLA2G2CQ5R387 149 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 OR10V1Q8NGI7 309 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 IL1F10Q8WWZ1 152 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 C12orf57Q99622 126 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 A0A1W2PPH5 198 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 A0A1W2PR80 420 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 BTBD17A6NE02 478 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 A6NLC8 198 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 WRBO00258 174 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 IFNA4P05014 189 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 SERPINE2P07093 398 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 SP9P0CG40 484 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 S100GP29377 79 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 SNRPEP62304 92 aaKnown RBP13.46□□□□□ -0.25
HOXD3-202ENST00000410016 SOHLH1Q5JUK2 328 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 ATP5SQ99766 215 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 KIAA1456Q9P272 454 aa13.46□□□□□ -0.25
HOXD3-202ENST00000410016 ESPL1Q14674 2120 aa13.46□□□□□ -0.26
HOXD3-202ENST00000410016 C5orf52A6NGY3 159 aa13.45□□□□□ -0.26
HOXD3-202ENST00000410016 C1orf196B1AJZ1 125 aa13.45□□□□□ -0.26
HOXD3-202ENST00000410016 TXNL1O43396 289 aa13.45□□□□□ -0.26
HOXD3-202ENST00000410016 ZNF14P17017 642 aaPredicted RBP13.45□□□□□ -0.26
HOXD3-202ENST00000410016 ZNF497Q6ZNH5 498 aa13.45□□□□□ -0.26
HOXD3-202ENST00000410016 SCCPDHQ8NBX0 429 aa13.45□□□□□ -0.26
HOXD3-202ENST00000410016 FER1L6-AS2Q96M78 137 aa13.45□□□□□ -0.26
HOXD3-202ENST00000410016 MED12LQ86YW9 2145 aa13.45□□□□□ -0.26
HOXD3-202ENST00000410016 OR2H2O95918 312 aa13.45□□□□□ -0.26
HOXD3-202ENST00000410016 ARG1P05089 322 aa13.45□□□□□ -0.26
HOXD3-202ENST00000410016 CELA3BP08861 270 aa13.45□□□□□ -0.26
HOXD3-202ENST00000410016 TAS2R30P59541 319 aa13.45□□□□□ -0.26
HOXD3-202ENST00000410016 ZNF561Q8N587 486 aa13.45□□□□□ -0.26
HOXD3-202ENST00000410016 NANOS1Q8WY41 292 aaKnown RBP13.45□□□□□ -0.26
HOXD3-202ENST00000410016 TNFSF15O95150 251 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 DHRS13Q6UX07 377 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 FAM24BQ8N5W8 94 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 LSM10Q969L4 123 aaKnown RBP13.44□□□□□ -0.26
HOXD3-202ENST00000410016 OR2J1Q9GZK6 312 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 TRGV5A0A0B4J1U4 118 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 A0A1W2PPE2 198 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 LRP5LA4QPB2 252 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 H3BP45 60 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 J3QW42 95 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 CD46P15529 392 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 RAB5AP20339 215 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 MDH2P40926 338 aaKnown RBP13.44□□□□□ -0.26
HOXD3-202ENST00000410016 HAGHQ16775 308 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 TBC1D28Q2M2D7 210 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 ZNF585BQ52M93 769 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 KRBOX4Q5JUW0 171 aa13.44□□□□□ -0.26
HOXD3-202ENST00000410016 ATP1A1-AS1Q5TC04 95 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms