RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 TNRC6CQ9HCJ0 1690 aaKnown RBP3.46□□□□□ -1.85
LSM5-206ENST00000409987 KDM6AO15550 1401 aaPredicted RBP3.46□□□□□ -1.86
LSM5-206ENST00000409987 YTHDC2Q9H6S0 1430 aaKnown RBP3.46□□□□□ -1.86
LSM5-206ENST00000409987 C8orf87E5RJ46 101 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 MFNGO00587 321 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 FFAR1O14842 300 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 TRAF3IP2O43734 574 aaPredicted RBP3.46□□□□□ -1.86
LSM5-206ENST00000409987 ZNF861PO60384 105 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 SS18L1O75177 396 aaPredicted RBP3.46□□□□□ -1.86
LSM5-206ENST00000409987 OR4Q2P0C623 313 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 CFL1P23528 166 aaKnown RBP3.46□□□□□ -1.86
LSM5-206ENST00000409987 ADORA1P30542 326 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 NOVP48745 357 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 ZNF136P52737 540 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 POLR2GP62487 172 aaKnown RBP eCLIP3.46□□□□□ -1.86
LSM5-206ENST00000409987 GTF2BQ00403 316 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 SMUG1Q53HV7 270 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 CLLU1OSQ5K130 101 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 SMIM5Q71RC9 77 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 NT5DC3Q86UY8 548 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 NIT1Q86X76 327 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 OR4M2Q8NGB6 313 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 OR52P1PQ8NH57 321 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 CLDN23Q96B33 292 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 IMP4Q96G21 291 aaKnown RBP3.46□□□□□ -1.86
LSM5-206ENST00000409987 SLC17A9Q9BYT1 436 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 ASB7Q9H672 318 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 WSB1Q9Y6I7 421 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 VIRMAQ69YN4 1812 aaKnown RBP3.46□□□□□ -1.86
LSM5-206ENST00000409987 TRIOBPQ9H2D6 2365 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 NHSQ6T4R5 1651 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 RGPD8O14715 1765 aaPredicted RBP3.46□□□□□ -1.86
LSM5-206ENST00000409987 COL18A1P39060 1754 aa3.46□□□□□ -1.86
LSM5-206ENST00000409987 MN1Q10571 1320 aaPredicted RBP3.45□□□□□ -1.86
LSM5-206ENST00000409987 VPS8Q8N3P4 1428 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 IGLV1-50A0A075B6I6 118 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 A0A0U1RQV1 116 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 MYBPHLA2RUH7 354 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 LAD1O00515 517 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 SERPINA1P01009 418 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 IGHV4-34P06331 123 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 MYL12AP19105 171 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 PRTN3P24158 256 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 IL3RAP26951 378 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 AGTR1P30556 359 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 CRISP3P54108 245 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 TAS2R43P59537 309 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 PFN3P60673 137 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 DYNLL1P63167 89 aaKnown RBP3.45□□□□□ -1.86
LSM5-206ENST00000409987 OR2F1Q13607 317 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 HIST3H3Q16695 136 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 TMEM205Q6UW68 189 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 RASSF6Q6ZTQ3 369 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 GALNT10Q86SR1 603 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 COMMD7Q86VX2 200 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 DCAF4L2Q8NA75 395 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 OR2M7Q8NG81 312 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 OR4M1Q8NGD0 313 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 OR6K3Q8NGY3 331 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 DTD1Q8TEA8 209 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 C18orf15Q96N68 181 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 SDHCQ99643 169 aaPredicted RBP3.45□□□□□ -1.86
LSM5-206ENST00000409987 DOK1Q99704 481 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 GGTLC1Q9BX51 225 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 MROQ9BYG7 248 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 PARP11Q9NR21 331 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 RBM12B-AS1Q9P1G2 102 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 CELA1Q9UNI1 258 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 PSG11Q9UQ72 335 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 FARSAQ9Y285 508 aaKnown RBP3.45□□□□□ -1.86
LSM5-206ENST00000409987 ARL2BPQ9Y2Y0 163 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 KLF13Q9Y2Y9 288 aaPredicted RBP3.45□□□□□ -1.86
LSM5-206ENST00000409987 MMACHCQ9Y4U1 282 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 EIF3AQ14152 1382 aaKnown RBP3.45□□□□□ -1.86
LSM5-206ENST00000409987 ADAMTS7Q9UKP4 1686 aa3.45□□□□□ -1.86
LSM5-206ENST00000409987 TRPM1Q7Z4N2 1603 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 TTC28Q96AY4 2481 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 FLT4P35916 1363 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 CARMIL3Q8ND23 1372 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 IGLV11-55A0A075B6I3 123 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 IGKV6D-21A0A0A0MT36 114 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 TRAV8-3A0A0A6YYJ7 113 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 CD300LBA8K4G0 201 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 VGLL3A8MV65 326 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 PANO1I0J062 215 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 FADS1O60427 444 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 OR2A4O95047 310 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 TNNC2P02585 160 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 RPSAP08865 295 aaKnown RBP3.44□□□□□ -1.86
LSM5-206ENST00000409987 LINC00614P0C842 121 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 ALOX5APP20292 161 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 G0S2P27469 103 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 CBX5P45973 191 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 SULT1A1P50225 295 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 SULT1A2P50226 295 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 RAB25P57735 213 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 RAB14P61106 215 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 LRRC75BQ2VPJ9 315 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 MPV17L2Q567V2 206 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 PRNTQ86SH4 94 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms