RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 DNAJB11Q9UBS4 358 aa11.81□□□□□ -0.52
LIMS2-206ENST00000409754 ITPR2Q14571 2701 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 C13orf42A0A1B0GVH6 325 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 SHISA9B4DS77 424 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 GPR31O00270 319 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 ADAP1O75689 374 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 C11orf87Q6NUJ2 197 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 ADAM5Q6NVV9 412 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 LDLRAD3Q86YD5 345 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 LRTM2Q8N967 370 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 OR11L1Q8NGX0 322 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 COQ2Q96H96 371 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 SLC5A7Q9GZV3 580 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 METTL8Q9H825 291 aaKnown RBP11.8□□□□□ -0.52
LIMS2-206ENST00000409754 HEXA-AS1Q9H8Q6 139 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 GCM1Q9NP62 436 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 KCNIP1Q9NZI2 227 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 RNF7Q9UBF6 113 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 NDRG3Q9UGV2 375 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 METRNQ9UJH8 293 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 OR2W1Q9Y3N9 320 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 APCP25054 2843 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 CHD3Q12873 2000 aaKnown RBP11.8□□□□□ -0.52
LIMS2-206ENST00000409754 LRBAP50851 2863 aa11.8□□□□□ -0.52
LIMS2-206ENST00000409754 IGKV1D-17A0A075B6S4 117 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 TRAV39A0A0B4J263 110 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 IGKV1D-13A0A0B4J2D9 117 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 OOEPA6NGQ2 149 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 C17orf100A8MU93 164 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 ARPC5O15511 151 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 TSC22D2O75157 780 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 ZNF737O75373 536 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 OR5AC1P0C628 307 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 IGKV1-13P0DP09 117 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 RPA2P15927 270 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 SSTR2P30874 369 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 ZNF767PQ75MW2 155 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 DMRTC2Q8IXT2 367 aaPredicted RBP11.79□□□□□ -0.52
LIMS2-206ENST00000409754 PPP1R35Q8TAP8 253 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 FAM222BQ8WU58 562 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 SECTM1Q8WVN6 248 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 PLPPR2Q96GM1 343 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 C2orf50Q96LR7 162 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 SHARPINQ9H0F6 387 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 TAF9BQ9HBM6 251 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 KIF25Q9UIL4 384 aa11.79□□□□□ -0.52
LIMS2-206ENST00000409754 KLF2Q9Y5W3 355 aaPredicted RBP11.79□□□□□ -0.52
LIMS2-206ENST00000409754 M0R233 179 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 MPPED1O15442 326 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 TFF1P04155 84 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 AESQ08117 197 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 OPCMLQ14982 345 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 NDUFA5Q16718 116 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 KRBOX4Q5JUW0 171 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 C6orf183Q5T699 404 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 LIAT1Q6ZQX7 453 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 ZNF818PQ6ZRF7 136 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 BOLLQ8N9W6 283 aaKnown RBP11.78□□□□□ -0.52
LIMS2-206ENST00000409754 IL1F10Q8WWZ1 152 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 SNX22Q96L94 193 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 RDH8Q9NYR8 311 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 OR1A1Q9P1Q5 309 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 ITGB1BP2Q9UKP3 347 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 ABCA12Q86UK0 2595 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 PLCE1Q9P212 2302 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 CSMD2Q7Z408 3487 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 MPC2O95563 127 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 IFNA21P01568 189 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 HEXAP06865 529 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 CD3EP07766 207 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 HOXB5P09067 269 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 TNFRSF1AP19438 455 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 PSMB6P28072 239 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 GABRA2P47869 451 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 TESK1Q15569 626 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 SP6Q3SY56 376 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 LRRC37A5PQ49AS3 106 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 TRAT1Q6PIZ9 186 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 ZNF546Q86UE3 836 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 CMTM1Q8IZ96 169 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 LGI3Q8N145 548 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 THAP6Q8TBB0 222 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 GLYATL2Q8WU03 294 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 MSI2Q96DH6 328 aaKnown RBP11.78□□□□□ -0.52
LIMS2-206ENST00000409754 OR10C1Q96KK4 312 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 MFFQ9GZY8 342 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 KCNJ16Q9NPI9 418 aa11.78□□□□□ -0.52
LIMS2-206ENST00000409754 IGHV3OR15-7A0A075B7D8 119 aa11.77□□□□□ -0.53
LIMS2-206ENST00000409754 C3orf85A0A1B0GTC6 90 aa11.77□□□□□ -0.53
LIMS2-206ENST00000409754 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.77□□□□□ -0.53
LIMS2-206ENST00000409754 MPTX1A8MV57 137 aa11.77□□□□□ -0.53
LIMS2-206ENST00000409754 C12orf77C9JDV5 145 aa11.77□□□□□ -0.53
LIMS2-206ENST00000409754 E7EQL1 145 aa11.77□□□□□ -0.53
LIMS2-206ENST00000409754 MGST3O14880 152 aa11.77□□□□□ -0.53
LIMS2-206ENST00000409754 PHF1O43189 567 aaPredicted RBP11.77□□□□□ -0.53
LIMS2-206ENST00000409754 HSPA12AO43301 675 aa11.77□□□□□ -0.53
LIMS2-206ENST00000409754 ATP6V1G1O75348 118 aa11.77□□□□□ -0.53
LIMS2-206ENST00000409754 S100A11P31949 105 aa11.77□□□□□ -0.53
LIMS2-206ENST00000409754 LUMP51884 338 aaPredicted RBP11.77□□□□□ -0.53
LIMS2-206ENST00000409754 SRPXP78539 464 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms