RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 SPIN3Q5JUX0 258 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.02□□□□□ -1.617e-11■■■■■ 33.9
R3HDM1-202ENST00000409478 MCEMP1Q8IX19 187 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 OR5D13Q8NGL4 314 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 STARD4Q96DR4 205 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 MED29Q9NX70 200 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 ELOVL5Q9NYP7 299 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 CCDC163A0A0D9SF12 145 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 A0A0U1RQV5 110 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 TMEM238LA0A1B0GVL6 79 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 TMPRSS2O15393 492 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 HYPMO75409 117 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 SERF1AO75920 110 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 ZNF205O95201 554 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 RAC2P15153 192 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 BIDP55957 195 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 CLRN1P58418 232 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 TMEM267Q0VDI3 215 aaPredicted RBP5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 Q0VG73 95 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 TESK1Q15569 626 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 LHX8Q68G74 356 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 FAM180AQ6UWF9 173 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 BAGE3Q86Y29 109 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 BAGE2Q86Y30 109 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 C20orf196Q8IYI0 205 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 ZNF525Q8N782 197 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 SMIM12Q96EX1 92 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 RTN4RQ9BZR6 473 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 CTXND1A0A1B0GTU2 59 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 SLC33A1O00400 549 aaPredicted RBP5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 PRKNO60260 465 aaPredicted RBP5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 CD33P20138 364 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 TMEM211Q6ICI0 200 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 CNKSR3Q6P9H4 555 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 CALHM1Q8IU99 346 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 PNKDQ8N490 385 aa5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 WDR61Q9GZS3 305 aaKnown RBP5.02□□□□□ -1.61
R3HDM1-202ENST00000409478 A0A1W2PNV4 684 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 GRIFINA4D1Z8 144 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 ZNF814B7Z6K7 855 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 TMEM238C9JI98 176 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 NDUFS8O00217 210 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 PDE6DO43924 150 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 CXCL10P02778 98 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 IL11P20809 199 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 CTSSP25774 331 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 S100GP29377 79 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 NSDHLQ15738 373 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 KMT5CQ86Y97 462 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 OR5P3Q8WZ94 311 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 PIGTQ969N2 578 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 SPSB1Q96BD6 273 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 PNRC2Q9NPJ4 139 aaKnown RBP5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 TAAR3PQ9P1P4 343 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 TP53TG3Q9ULZ0 132 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 PIGLQ9Y2B2 252 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 IGHV1-69-2A0A0G2JMI3 117 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 H0Y980 276 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 IGHG1P01857 330 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 LHX2P50458 406 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 KRTDAPP60985 99 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 OCIAD2Q56VL3 154 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 PRR22Q8IZ63 422 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 NUDT11Q96G61 164 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 LIN37Q96GY3 246 aaPredicted RBP5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 MRPL13Q9BYD1 178 aaKnown RBP5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 HRASLS2Q9NWW9 162 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 HCFC2Q9Y5Z7 792 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 FREM3P0C091 2139 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 MDFIC2A0A1B0GVS7 189 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 A0A1W2PP55 124 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 ZNF253O75346 499 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 MAJINQ3KP22 176 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 FFAR4Q5NUL3 377 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 Q6ZSR3 168 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 TMPRSS7Q7RTY8 843 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 SGMS2Q8NHU3 365 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 BADQ92934 168 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 ADIPOR1Q96A54 375 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 LYZL4Q96KX0 146 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 CST9LQ9H4G1 147 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 FAM60AQ9NP50 221 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 ALKBH4Q9NXW9 302 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 PPIAL4AQ9Y536 164 aa5.01□□□□□ -1.61
R3HDM1-202ENST00000409478 TNFSF12-TNFSF13A0A0A6YY99 330 aa5□□□□□ -1.61
R3HDM1-202ENST00000409478 TRBV9A0A0B4J1U6 114 aa5□□□□□ -1.61
R3HDM1-202ENST00000409478 A0A1W2PQU0 124 aa5□□□□□ -1.61
R3HDM1-202ENST00000409478 H3BP45 60 aa5□□□□□ -1.61
R3HDM1-202ENST00000409478 K7ERU9 68 aa5□□□□□ -1.61
R3HDM1-202ENST00000409478 RER1O15258 196 aa5□□□□□ -1.61
R3HDM1-202ENST00000409478 TNFSF12O43508 249 aa5□□□□□ -1.61
R3HDM1-202ENST00000409478 NXPH3O95157 252 aa5□□□□□ -1.61
R3HDM1-202ENST00000409478 REG1AP05451 166 aa5□□□□□ -1.61
R3HDM1-202ENST00000409478 FAHP16930 419 aa5□□□□□ -1.61
R3HDM1-202ENST00000409478 TSPOP30536 169 aa5□□□□□ -1.61
R3HDM1-202ENST00000409478 LINC00310P59036 64 aa5□□□□□ -1.61
R3HDM1-202ENST00000409478 RHOGP84095 191 aa5□□□□□ -1.61
R3HDM1-202ENST00000409478 DLX2Q07687 328 aaPredicted RBP5□□□□□ -1.61
R3HDM1-202ENST00000409478 PLCXD2Q0VAA5 305 aa5□□□□□ -1.61
R3HDM1-202ENST00000409478 MALLQ13021 153 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms