RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 TMEM235A6NFC5 223 aa16.97■□□□□ 0.31
C4orf48-201ENST00000409248 CLDN34H7C241 214 aa16.97■□□□□ 0.31
C4orf48-201ENST00000409248 NPFFO15130 113 aa16.97■□□□□ 0.31
C4orf48-201ENST00000409248 GNG2P59768 71 aa16.97■□□□□ 0.31
C4orf48-201ENST00000409248 PNLIPRP3Q17RR3 467 aa16.97■□□□□ 0.31
C4orf48-201ENST00000409248 C6orf183Q5T699 404 aa16.97■□□□□ 0.31
C4orf48-201ENST00000409248 HACD4Q5VWC8 232 aa16.97■□□□□ 0.31
C4orf48-201ENST00000409248 OLFML2AQ68BL7 652 aa16.97■□□□□ 0.31
C4orf48-201ENST00000409248 TRAT1Q6PIZ9 186 aa16.97■□□□□ 0.31
C4orf48-201ENST00000409248 MOB1BQ7L9L4 216 aa16.97■□□□□ 0.31
C4orf48-201ENST00000409248 DTX3Q8N9I9 347 aa16.97■□□□□ 0.31
C4orf48-201ENST00000409248 MIXL1Q9H2W2 232 aa16.97■□□□□ 0.31
C4orf48-201ENST00000409248 PRDM13Q9H4Q3 707 aa16.97■□□□□ 0.31
C4orf48-201ENST00000409248 EXTL2Q9UBQ6 330 aa16.97■□□□□ 0.31
C4orf48-201ENST00000409248 FAM96BQ9Y3D0 163 aa16.97■□□□□ 0.31
C4orf48-201ENST00000409248 SOX21Q9Y651 276 aaPredicted RBP16.97■□□□□ 0.31
C4orf48-201ENST00000409248 TRAV39A0A0B4J263 110 aa16.96■□□□□ 0.31
C4orf48-201ENST00000409248 ZNF729A6NN14 1252 aaPredicted RBP16.96■□□□□ 0.31
C4orf48-201ENST00000409248 POM121CA8CG34 1229 aa16.96■□□□□ 0.31
C4orf48-201ENST00000409248 C17orf98A8MV24 154 aa16.96■□□□□ 0.31
C4orf48-201ENST00000409248 NAPSAO96009 420 aa16.96■□□□□ 0.31
C4orf48-201ENST00000409248 GZMHP20718 246 aa16.96■□□□□ 0.31
C4orf48-201ENST00000409248 DLX1P56177 255 aa16.96■□□□□ 0.31
C4orf48-201ENST00000409248 TAS2R20P59543 309 aa16.96■□□□□ 0.31
C4orf48-201ENST00000409248 ACTG1P63261 375 aa16.96■□□□□ 0.31
C4orf48-201ENST00000409248 PITPNAQ00169 270 aa16.96■□□□□ 0.31
C4orf48-201ENST00000409248 PRB3Q04118 309 aaPredicted RBP16.96■□□□□ 0.31
C4orf48-201ENST00000409248 PIP4P2Q8N4L2 257 aa16.96■□□□□ 0.31
C4orf48-201ENST00000409248 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.96■□□□□ 0.31
C4orf48-201ENST00000409248 SPATA3Q8NHX4 192 aa16.96■□□□□ 0.31
C4orf48-201ENST00000409248 SETD6Q8TBK2 473 aa16.96■□□□□ 0.31
C4orf48-201ENST00000409248 HDHD3Q9BSH5 251 aaPredicted RBP16.96■□□□□ 0.31
C4orf48-201ENST00000409248 AUNIPQ9H7T9 357 aa16.96■□□□□ 0.31
C4orf48-201ENST00000409248 KCNIP1Q9NZI2 227 aa16.96■□□□□ 0.31
C4orf48-201ENST00000409248 TRBV6-6A0A0A6YYG2 114 aa16.95■□□□□ 0.3
C4orf48-201ENST00000409248 A0A0U1RQK1 487 aa16.95■□□□□ 0.3
C4orf48-201ENST00000409248 FBP1P09467 338 aa16.95■□□□□ 0.3
C4orf48-201ENST00000409248 S100A5P33763 92 aa16.95■□□□□ 0.3
C4orf48-201ENST00000409248 DLX6P56179 175 aa16.95■□□□□ 0.3
C4orf48-201ENST00000409248 CNPY1Q3B7I2 92 aa16.95■□□□□ 0.3
C4orf48-201ENST00000409248 CNIH2Q6PI25 160 aa16.95■□□□□ 0.3
C4orf48-201ENST00000409248 RAB9BQ9NP90 201 aa16.95■□□□□ 0.3
C4orf48-201ENST00000409248 CALYQ9NYX4 217 aa16.95■□□□□ 0.3
C4orf48-201ENST00000409248 MGAT4AQ9UM21 535 aa16.95■□□□□ 0.3
C4orf48-201ENST00000409248 MRPS7Q9Y2R9 242 aaKnown RBP16.95■□□□□ 0.3
C4orf48-201ENST00000409248 KBTBD11-OT1A0A1B0GTJ5 212 aa16.94■□□□□ 0.3
C4orf48-201ENST00000409248 A0A1W2PRD5 423 aa16.94■□□□□ 0.3
C4orf48-201ENST00000409248 A0A1W2PRF3 423 aa16.94■□□□□ 0.3
C4orf48-201ENST00000409248 A0A1W2PRM7 423 aa16.94■□□□□ 0.3
C4orf48-201ENST00000409248 ORC5O43913 435 aa16.94■□□□□ 0.3
C4orf48-201ENST00000409248 CLPXO76031 633 aa16.94■□□□□ 0.3
C4orf48-201ENST00000409248 RNASE1P07998 156 aaKnown RBP16.94■□□□□ 0.3
C4orf48-201ENST00000409248 SAA4P35542 130 aa16.94■□□□□ 0.3
C4orf48-201ENST00000409248 MIDNQ504T8 468 aa16.94■□□□□ 0.3
C4orf48-201ENST00000409248 BAIAP2L2Q6UXY1 529 aa16.94■□□□□ 0.3
C4orf48-201ENST00000409248 Q6YL49 198 aa16.94■□□□□ 0.3
C4orf48-201ENST00000409248 ZNF782Q6ZMW2 699 aaPredicted RBP16.94■□□□□ 0.3
C4orf48-201ENST00000409248 ZNF554Q86TJ5 538 aa16.94■□□□□ 0.3
C4orf48-201ENST00000409248 C11orf42Q8N5U0 333 aa16.94■□□□□ 0.3
C4orf48-201ENST00000409248 TMEM86BQ8N661 226 aa16.94■□□□□ 0.3
C4orf48-201ENST00000409248 NUDCD2Q8WVJ2 157 aa16.94■□□□□ 0.3
C4orf48-201ENST00000409248 SSMEM1Q8WWF3 244 aa16.94■□□□□ 0.3
C4orf48-201ENST00000409248 DIRAS2Q96HU8 199 aa16.94■□□□□ 0.3
C4orf48-201ENST00000409248 DUX5Q96PT3 197 aa16.94■□□□□ 0.3
C4orf48-201ENST00000409248 MBNL3Q9NUK0 354 aaKnown RBP16.94■□□□□ 0.3
C4orf48-201ENST00000409248 MEIOCA2RUB1 952 aa16.93■□□□□ 0.3
C4orf48-201ENST00000409248 HOXA3O43365 443 aaPredicted RBP16.93■□□□□ 0.3
C4orf48-201ENST00000409248 TPPPO94811 219 aa16.93■□□□□ 0.3
C4orf48-201ENST00000409248 MELTFP08582 738 aa16.93■□□□□ 0.3
C4orf48-201ENST00000409248 IGHV1-8P0DP01 117 aa16.93■□□□□ 0.3
C4orf48-201ENST00000409248 RCC1P18754 421 aaPredicted RBP16.93■□□□□ 0.3
C4orf48-201ENST00000409248 COX7A1P24310 79 aa16.93■□□□□ 0.3
C4orf48-201ENST00000409248 SSTR5P35346 364 aa16.93■□□□□ 0.3
C4orf48-201ENST00000409248 SLC9A3R2Q15599 337 aa16.93■□□□□ 0.3
C4orf48-201ENST00000409248 C17orf58Q2M2W7 97 aa16.93■□□□□ 0.3
C4orf48-201ENST00000409248 HCP5Q6MZN7 132 aa16.93■□□□□ 0.3
C4orf48-201ENST00000409248 ZNF880Q6PDB4 577 aa16.93■□□□□ 0.3
C4orf48-201ENST00000409248 LDLRAD3Q86YD5 345 aa16.93■□□□□ 0.3
C4orf48-201ENST00000409248 OR13D1Q8NGV5 346 aa16.93■□□□□ 0.3
C4orf48-201ENST00000409248 C15orf40Q8WUR7 153 aa16.93■□□□□ 0.3
C4orf48-201ENST00000409248 ARL11Q969Q4 196 aa16.93■□□□□ 0.3
C4orf48-201ENST00000409248 ELF5Q9UKW6 265 aaPredicted RBP16.93■□□□□ 0.3
C4orf48-201ENST00000409248 POMT1Q9Y6A1 747 aa16.93■□□□□ 0.3
C4orf48-201ENST00000409248 SPINT2O43291 252 aa16.92■□□□□ 0.3
C4orf48-201ENST00000409248 FCGR3AP08637 254 aa16.92■□□□□ 0.3
C4orf48-201ENST00000409248 CGB3P0DN86 165 aa16.92■□□□□ 0.3
C4orf48-201ENST00000409248 CGB7P0DN87 165 aa16.92■□□□□ 0.3
C4orf48-201ENST00000409248 DTYMKP23919 212 aa16.92■□□□□ 0.3
C4orf48-201ENST00000409248 PRAMEF5Q5TYX0 476 aa16.92■□□□□ 0.3
C4orf48-201ENST00000409248 HEPN1Q6WQI6 88 aa16.92■□□□□ 0.3
C4orf48-201ENST00000409248 PNKDQ8N490 385 aa16.92■□□□□ 0.3
C4orf48-201ENST00000409248 TAF9BQ9HBM6 251 aa16.92■□□□□ 0.3
C4orf48-201ENST00000409248 Q9N2K0 584 aa16.92■□□□□ 0.3
C4orf48-201ENST00000409248 RABL2AQ9UBK7 228 aaPredicted RBP16.92■□□□□ 0.3
C4orf48-201ENST00000409248 RABL2BQ9UNT1 228 aa16.92■□□□□ 0.3
C4orf48-201ENST00000409248 SESN1Q9Y6P5 492 aa16.92■□□□□ 0.3
C4orf48-201ENST00000409248 BTBD17A6NE02 478 aa16.91■□□□□ 0.3
C4orf48-201ENST00000409248 C12orf77C9JDV5 145 aa16.91■□□□□ 0.3
C4orf48-201ENST00000409248 C15orf65H3BRN8 121 aa16.91■□□□□ 0.3
C4orf48-201ENST00000409248 HLA-DQB1P01920 261 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms