RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 OR2T10Q8NGZ9 312 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 CHPT1Q8WUD6 406 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 UFD1Q92890 307 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 CITED2Q99967 270 aaPredicted RBP7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 FKBP14Q9NWM8 211 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 BLOC1S6Q9UL45 172 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 PEX16Q9Y5Y5 336 aa7.25□□□□□ -1.25
SNORD88A-201ENST00000408314 IGHV1-3A0A0C4DH29 117 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 A0A1W2PPK0 400 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 PSMB11A5LHX3 300 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 MAGEA13PA6NCF6 341 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 C15orf65H3BRN8 121 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 PDCD6O75340 191 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 SC5DO75845 299 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 ARL6IP5O75915 188 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 BPNT1O95861 308 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 CD33P20138 364 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 CD83Q01151 205 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 MED22Q15528 200 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 TMEM95Q3KNT9 176 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 ACSM3Q53FZ2 586 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 HSD17B12Q53GQ0 312 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 KPRPQ5T749 579 aaPredicted RBP7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 SYT6Q5T7P8 510 aaPredicted RBP7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 SAMD5Q5TGI4 173 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 MOB1BQ7L9L4 216 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 MOB3BQ86TA1 216 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 TGIF2LXQ8IUE1 241 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 GAPTQ8N292 157 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 OR6M1Q8NGM8 313 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 KCNG3Q8TAE7 436 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 CCDC107Q8WV48 283 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 LEAP2Q969E1 77 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 ORAI1Q96D31 301 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 Q96M66 194 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 NEDD4LQ96PU5 975 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 TMEM59Q9BXS4 323 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 ABRACLQ9P1F3 81 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 JPT1Q9UK76 154 aa7.24□□□□□ -1.25
SNORD88A-201ENST00000408314 TRAV39A0A0B4J263 110 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 A0A1W2PP11 408 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 SERPINE3A8MV23 424 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 C12orf77C9JDV5 145 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 PTGES3LE9PB15 166 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 RGS10O43665 173 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 RRP9O43818 475 aaKnown RBP7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 MPIG6BO95866 241 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 IGKV1D-33P01593 117 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 IGKV1-33P01594 117 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 IGHV3-7P01780 117 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 HTR2CP28335 458 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 CD1BP29016 333 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 ZNF137PP52743 207 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 SLC35A2P78381 396 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 EBI3Q14213 229 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 BEAN1Q3B7T3 259 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 LAIR2Q6ISS4 152 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 SLC25A48Q6ZT89 311 aaKnown RBP7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 SLC35E3Q7Z769 313 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 C5orf56Q8N8D9 126 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 OR4K15Q8NH41 348 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 DPF1Q92782 380 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 URM1Q9BTM9 101 aaKnown RBP7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 TMED9Q9BVK6 235 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 RIMS4Q9H426 269 aaPredicted RBP7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 BANF2Q9H503 90 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 ISYNA1Q9NPH2 558 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 ZFP57Q9NU63 452 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 LIN7CQ9NUP9 197 aaKnown RBP7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 NECAP2Q9NVZ3 263 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 MGAT4AQ9UM21 535 aa7.23□□□□□ -1.25
SNORD88A-201ENST00000408314 CMYA5Q8N3K9 4069 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 A0A1W2PRX2 142 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 NCBP2LA6PVI3 153 aaKnown RBP7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 AP4M1O00189 453 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 PIN1P1O15428 100 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 MOSP00540 346 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 HBZP02008 142 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 AMY1AP04745 511 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 AMY2AP04746 511 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 UCHL1P09936 223 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 OR5H8P0DN80 308 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 SRMP19623 302 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 MYF6P23409 242 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 PSMD7P51665 324 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 LOXL3P58215 753 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 RPS27AP62979 156 aaKnown RBP7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 HTD2P86397 168 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 MLLT11Q13015 90 aaPredicted RBP7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 HNF4GQ14541 408 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 NKAPLQ5M9Q1 402 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 LY6G6FQ5SQ64 297 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 C1orf100Q5SVJ3 147 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 UNQ9370/PRO34162Q6UXP9 181 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 Q6ZS46 218 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 OR2W3Q7Z3T1 314 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 CEACAM19Q7Z692 300 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 LYPD6Q86Y78 171 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 C1QL4Q86Z23 238 aa7.22□□□□□ -1.25
SNORD88A-201ENST00000408314 LYG1Q8N1E2 194 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms