RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 SPATA45Q537H7 98 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 C1orf100Q5SVJ3 147 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 C1RLQ9NZP8 487 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 TOGARAM1Q9Y4F4 1720 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.33□□□□□ -0.6
RNF43-201ENST00000407977 FAM90A10PA6NDY2 464 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 FAM90A18PA6NE21 464 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 FAM90A16PA6NEW6 464 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 FAM90A20PA6NIJ5 464 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 FAM90A8PA6NJQ4 464 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 FAM90A7PA6NKC0 464 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 FAM90A22PA8MWA6 464 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 FAM90A12PA8MX19 464 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 FAM90A5PA8MXJ8 464 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 FAM90A23PA8MXZ1 464 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 FAM90A15PP0C7V4 464 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 FAM90A13PP0C7W8 464 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 FAM90A14PP0C7W9 464 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 FAM90A24PP0C7X0 464 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 ROM1Q03395 351 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 RBM14Q96PK6 669 aaKnown RBP11.33□□□□□ -0.6
RNF43-201ENST00000407977 TMEM222Q9H0R3 208 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 KCNE5Q9UJ90 142 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 LIMS1P48059 325 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 ABHD14AQ9BUJ0 271 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 MFRPQ9BY79 579 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 ZNF256Q9Y2P7 627 aaPredicted RBP11.33□□□□□ -0.6
RNF43-201ENST00000407977 KNL1Q8NG31 2342 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 FAM90A26D6RGX4 464 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 PATE4P0C8F1 98 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 PLP1P60201 277 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 RASL10BQ96S79 203 aa11.33□□□□□ -0.6
RNF43-201ENST00000407977 OR2A4O95047 310 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 HPRT1P00492 218 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 NGFRP08138 427 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 IFI6P09912 130 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 GBGT1Q8N5D6 347 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 FLYWCH2Q96CP2 140 aaKnown RBP11.32□□□□□ -0.6
RNF43-201ENST00000407977 OR2A7Q96R45 310 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 FAM60AQ9NP50 221 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 CFDP00746 253 aaPredicted RBP11.32□□□□□ -0.6
RNF43-201ENST00000407977 CD40P25942 277 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 LGALS7P47929 136 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 MGAT2Q10469 447 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 C1orf174Q8IYL3 243 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 DDA1Q9BW61 102 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 PARD6GQ9BYG4 376 aaPredicted RBP11.32□□□□□ -0.6
RNF43-201ENST00000407977 FOXQ1Q9C009 403 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 CISD1Q9NZ45 108 aaKnown RBP11.32□□□□□ -0.6
RNF43-201ENST00000407977 CLEC1BQ9P126 229 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 PCOLCE2Q9UKZ9 415 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 NPIPB9F8W1W9 429 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 ISG15P05161 165 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 SELENOTP62341 195 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 GABRA6Q16445 453 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 PIGYQ3MUY2 71 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 REC114Q7Z4M0 266 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 TRBV9A0A0B4J1U6 114 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 A0A0B4J293 547 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 TRGV8A0A0C4DH27 118 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 KCNAB3O43448 404 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 HKR1P10072 659 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 ASCL5Q7RTU5 278 aa11.32□□□□□ -0.6
RNF43-201ENST00000407977 EIF3GO75821 320 aaKnown RBP eCLIP11.31□□□□□ -0.6
RNF43-201ENST00000407977 CD82P27701 267 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 PRSS27Q9BQR3 290 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 TMEM70Q9BUB7 260 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 PAXXQ9BUH6 204 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 LOC102724200A0A096LPH7 203 aaPredicted RBP11.31□□□□□ -0.6
RNF43-201ENST00000407977 A0A1W2PPV9 198 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 DXOO77932 396 aaKnown RBP11.31□□□□□ -0.6
RNF43-201ENST00000407977 ZDHHC16Q969W1 377 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 CDIPTO14735 213 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 COX6CP09669 75 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 ASAH2BP0C7U1 165 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 LHX8Q68G74 356 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 PQLC2Q6ZP29 291 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 TGIF2LYQ8IUE0 185 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 OR8I2Q8N0Y5 310 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 GPR35Q9HC97 309 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 C3orf80F5H4A9 247 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 J3QR06 171 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 CCL2P13500 99 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 PMCHL2Q9BQD1 86 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 YBX2Q9Y2T7 364 aaKnown RBP11.31□□□□□ -0.6
RNF43-201ENST00000407977 ALS2Q96Q42 1657 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 P2RY4P51582 365 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 SMAGPQ0VAQ4 97 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 LEMD1Q68G75 181 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 SLC25A34Q6PIV7 304 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 GFRALQ6UXV0 394 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 ZAR1Q86SH2 424 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 RAB1CQ92928 201 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 SPOCK3Q9BQ16 436 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 PCGF1Q9BSM1 259 aa11.31□□□□□ -0.6
RNF43-201ENST00000407977 BRWD1Q9NSI6 2320 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 K7EQS6 105 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 CEBPDP49716 269 aaPredicted RBP11.3□□□□□ -0.6
RNF43-201ENST00000407977 RUNX1Q01196 453 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 AQP3Q92482 292 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms