RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 GPR157Q5UAW9 335 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 GGNBP1Q5YKI7 109 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 ZNF474Q6S9Z5 364 aaPredicted RBP10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 FAM71E2Q8N5Q1 922 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 OR5T2Q8NGG2 359 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 PCNPQ8WW12 178 aaKnown RBP10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 OR10C1Q96KK4 312 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 OBP2BQ9NPH6 170 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 TREM2Q9NZC2 230 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 PCDHB10Q9UN67 800 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 FBN1P35555 2871 aaKnown RBP10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 BORCS7-ASMTA0A0B4J1R7 106 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 TMEM210A6NLX4 147 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 GPR31O00270 319 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 FGF16O43320 207 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 DEDDO75618 318 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 NAPSAO96009 420 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 PPYP01298 95 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 GAPDHP04406 335 aaKnown RBP10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 ACAA1P09110 424 aaPredicted RBP10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 RAC2P15153 192 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 PVALBP20472 110 aaPredicted RBP10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 IL32P24001 234 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 FXYD4P59646 89 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 DAZAP2Q15038 168 aaPredicted RBP10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 BEX5Q5H9J7 111 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 Q5PR19 223 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 Q6ZT83 130 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 MDP1Q86V88 176 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 KRTAP1-3Q8IUG1 177 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 CMTM1Q8IZ96 169 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 FAM58AQ8N1B3 248 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 OR4A4PQ8NGN8 299 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 HPSE2Q8WWQ2 592 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 ARL11Q969Q4 196 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 Q96MF0 132 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 WDR13Q9H1Z4 485 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 PLEKHF2Q9H8W4 249 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 SLC2A9Q9NRM0 540 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 BEX4Q9NWD9 120 aaPredicted RBP10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 ELOVL5Q9NYP7 299 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 ATP23Q9Y6H3 246 aa10.94□□□□□ -0.66
SMARCB1-203ENST00000407082 CDS2O95674 445 aa10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 ZNF250P15622 560 aa10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 CBR1P16152 277 aa10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 PRKACAP17612 351 aa10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 RPL12P30050 165 aaKnown RBP10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 NPBWR2P48146 333 aa10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 FAM27E3Q08E93 113 aa10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 GNMTQ14749 295 aa10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 FBXL19-AS1Q494R0 122 aa10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 C1QTNF12Q5T7M4 302 aa10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 HAGHLQ6PII5 290 aaPredicted RBP10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 IL34Q6ZMJ4 242 aa10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 CXorf67Q86X51 503 aaPredicted RBP10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 SPERTQ8NA61 448 aa10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 LINC01560Q8TB33 94 aa10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 RNASE6Q93091 150 aaKnown RBP10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 IL22RA2Q969J5 263 aa10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 ZNF75AQ96N20 296 aa10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 TMEM100Q9NV29 134 aa10.93□□□□□ -0.66
SMARCB1-203ENST00000407082 C3orf85A0A1B0GTC6 90 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 H0YIZ8 118 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 DEGS1O15121 323 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 MPPED1O15442 326 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 ST8SIA3O43173 380 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 GPR137BO60478 399 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 SMPD2O60906 423 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 NGFP01138 241 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 OR5AC1P0C628 307 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 CCL2P13500 99 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 AADACP22760 399 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 P2RY1P47900 373 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 FOXG1P55316 489 aaPredicted RBP10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 PPP1CBP62140 327 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 P2RY6Q15077 328 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 HIKESHIQ53FT3 197 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 ZNF695Q8IW36 515 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 C17orf78Q8N4C9 275 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 KIRREL1Q96J84 757 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 SLC5A7Q9GZV3 580 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 OR51I2Q9H344 312 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 MTCH1Q9NZJ7 389 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 OR5AC2Q9NZP5 309 aa10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 UBE2J1Q9Y385 318 aaPredicted RBP10.92□□□□□ -0.66
SMARCB1-203ENST00000407082 ZSCAN5BA6NJL1 495 aa10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 IQCF6A8MYZ5 107 aa10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 C16orf97H3BN30 126 aa10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 SH2D1BO14796 132 aa10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 BET1O15155 118 aa10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 PHF1O43189 567 aaPredicted RBP10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 LYZL6O75951 148 aa10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 HKR1P10072 659 aa10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 MMP9P14780 707 aa10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 ZNF14P17017 642 aaPredicted RBP10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 IGHV1-2P23083 117 aa10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 WNT5AP41221 380 aa10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 SUMF2Q8NBJ7 301 aa10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 MRPL24Q96A35 216 aaKnown RBP10.91□□□□□ -0.66
SMARCB1-203ENST00000407082 NARFLQ9H6Q4 476 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms