RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 SSTR5P35346 364 aa6.87□□□□□ -1.31
GPC3-203ENST00000406757 PPP5CP53041 499 aa6.87□□□□□ -1.31
GPC3-203ENST00000406757 RPL31P62899 125 aaKnown RBP6.87□□□□□ -1.31
GPC3-203ENST00000406757 ARL6IP1Q15041 203 aa6.87□□□□□ -1.31
GPC3-203ENST00000406757 IGSF11Q5DX21 431 aa6.87□□□□□ -1.31
GPC3-203ENST00000406757 ZNF57Q68EA5 555 aaPredicted RBP6.87□□□□□ -1.31
GPC3-203ENST00000406757 FAAP20Q6NZ36 180 aa6.87□□□□□ -1.31
GPC3-203ENST00000406757 LINC00299Q6ZSB3 139 aa6.87□□□□□ -1.31
GPC3-203ENST00000406757 HOGA1Q86XE5 327 aa6.87□□□□□ -1.31
GPC3-203ENST00000406757 GDPD1Q8N9F7 314 aa6.87□□□□□ -1.31
GPC3-203ENST00000406757 SMIM4Q8WVI0 70 aa6.87□□□□□ -1.31
GPC3-203ENST00000406757 SNAPC3Q92966 411 aa6.87□□□□□ -1.31
GPC3-203ENST00000406757 ARL11Q969Q4 196 aa6.87□□□□□ -1.31
GPC3-203ENST00000406757 WDR12Q9GZL7 423 aaKnown RBP6.87□□□□□ -1.31
GPC3-203ENST00000406757 TAF9BQ9HBM6 251 aa6.87□□□□□ -1.31
GPC3-203ENST00000406757 C12orf4Q9NQ89 552 aa6.87□□□□□ -1.31
GPC3-203ENST00000406757 TMEM160Q9NX00 188 aa6.87□□□□□ -1.31
GPC3-203ENST00000406757 LPAR3Q9UBY5 353 aa6.87□□□□□ -1.31
GPC3-203ENST00000406757 MTFP1Q9UDX5 166 aa6.87□□□□□ -1.31
GPC3-203ENST00000406757 KIAA2026Q5HYC2 2103 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 TRGV10A0A0A0MS01 117 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 PPIAL4CA0A0B4J2A2 164 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 IGKV1-6A0A0C4DH72 117 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 hADV38S2A0JD32 116 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 TRDCB7Z8K6 153 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 SULT1C2O00338 296 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 CA11O75493 328 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 CD3DP04234 171 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 PPIAL4GP0DN37 164 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 IL7P13232 177 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 SRD5A1P18405 259 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 PTBP1P26599 531 aaKnown RBP eCLIP6.86□□□□□ -1.315e-7■■■■□ 22.9
GPC3-203ENST00000406757 ERP29P30040 261 aaKnown RBP6.86□□□□□ -1.31
GPC3-203ENST00000406757 RFX2P48378 723 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 KCNJ3P48549 501 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 ARF6P62330 175 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 C17orf58Q2M2W7 97 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 PRAMEF5Q5TYX0 476 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 TRIQKQ629K1 86 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 ZNF880Q6PDB4 577 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 GAPTQ8N292 157 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 BEST4Q8NFU0 473 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 OR52L2PQ8NGH6 319 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 OR4D10Q8NGI6 311 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 C15orf40Q8WUR7 153 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 IL1F10Q8WWZ1 152 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 LEAP2Q969E1 77 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 TRIM63Q969Q1 353 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 CREB3L1Q96BA8 519 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 RAB39BQ96DA2 213 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 KIRREL1Q96J84 757 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 TMPRSS13Q9BYE2 586 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 TINAGL1Q9GZM7 467 aaPredicted RBP6.86□□□□□ -1.31
GPC3-203ENST00000406757 RIMS4Q9H426 269 aaPredicted RBP6.86□□□□□ -1.31
GPC3-203ENST00000406757 SCPEP1Q9HB40 452 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 ZNF286AQ9HBT8 521 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 CALYQ9NYX4 217 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 KCNIP1Q9NZI2 227 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 ONECUT1Q9UBC0 465 aa6.86□□□□□ -1.31
GPC3-203ENST00000406757 RPUSD1Q9UJJ7 312 aaKnown RBP6.86□□□□□ -1.31
GPC3-203ENST00000406757 TRBV6-6A0A0A6YYG2 114 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 A0A1W2PPE3 182 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 FUOMA2VDF0 154 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 C15orf65H3BRN8 121 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 BET1O15155 118 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 FABP7O15540 132 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 TPPPO94811 219 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 HBZP02008 142 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 CGB3P0DN86 165 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 CGB7P0DN87 165 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 DTYMKP23919 212 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 NFYBP25208 207 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 RCVRNP35243 200 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 HRH1P35367 487 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 CBX5P45973 191 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 INPP1P49441 399 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 GZMKP49863 264 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 NPY4RP50391 375 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 ARPC4P59998 168 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 HLA-DRB3P79483 266 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 GNMTQ14749 295 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 HERPUD1Q15011 391 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 HMGN3Q15651 99 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 FAM120AOSQ5T036 256 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 METTL11BQ5VVY1 283 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 STEAP3Q658P3 488 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 C16orf87Q6PH81 154 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 ZNF782Q6ZMW2 699 aaPredicted RBP6.85□□□□□ -1.31
GPC3-203ENST00000406757 PDZD9Q8IXQ8 264 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 TOMM5Q8N4H5 51 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 ZNF565Q8N9K5 539 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 LY6G5BQ8NDX9 201 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 OR10V1Q8NGI7 309 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 MSI2Q96DH6 328 aaKnown RBP6.85□□□□□ -1.31
GPC3-203ENST00000406757 SUCNR1Q9BXA5 334 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 MBNL3Q9NUK0 354 aaKnown RBP6.85□□□□□ -1.31
GPC3-203ENST00000406757 OR6C3Q9NZP0 311 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 OR1A1Q9P1Q5 309 aa6.85□□□□□ -1.31
GPC3-203ENST00000406757 RABL2AQ9UBK7 228 aaPredicted RBP6.85□□□□□ -1.31
GPC3-203ENST00000406757 ANXA10Q9UJ72 324 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms