RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 RTN4IP1Q8WWV3 396 aaPredicted RBP13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 LIN37Q96GY3 246 aaPredicted RBP13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 NECAP2Q9NVZ3 263 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 SEC16AO15027 2179 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 SHISA8B8ZZ34 492 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 PROB1E7EW31 1015 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 ST8SIA3O43173 380 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 LIPFP07098 398 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 CRYGCP07315 174 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 CD33P20138 364 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 ARL4DP49703 201 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 TMEM182Q6ZP80 229 aaPredicted RBP13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 C16orf47Q6ZP98 133 aaPredicted RBP13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 LYZL2Q7Z4W2 148 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 OR52L2PQ8NGH6 319 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 OR52M1Q8NGK5 317 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 PP6455Q8WZ26 134 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 PPIAL4GP0DN37 164 aa13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 PPP1CCP36873 323 aaKnown RBP13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 DUSP3P51452 185 aaPredicted RBP13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 ZNF880Q6PDB4 577 aa13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 D2HGDHQ8N465 521 aa13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 NIPSNAP3BQ9BS92 247 aa13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 CABLES2Q9BTV7 478 aa13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 LYRM2Q9NU23 88 aaPredicted RBP13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 ZNF850A8MQ14 1090 aa13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 CLDN34H7C241 214 aa13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 K7N7A8 449 aa13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 EFNA2O43921 213 aa13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 GNB2P62879 340 aa13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 NIT1Q86X76 327 aa13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 SAXO1Q8IYX7 474 aa13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 APCDD1LQ8NCL9 501 aa13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 IL22RA2Q969J5 263 aa13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 LYZL4Q96KX0 146 aa13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 HDHD3Q9BSH5 251 aaPredicted RBP13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 SRD5A3Q9H8P0 318 aa13.97□□□□□ -0.17
COL4A3BP-204ENST00000405807 METTL12A8MUP2 240 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 OR7C2O60412 319 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 RAMP3O60896 148 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 RND2P52198 227 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 C5orf64Q2M2E5 130 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 LIAT1Q6ZQX7 453 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 ERASQ7Z444 233 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 LMX1AQ8TE12 382 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 C18orf12Q96KH6 178 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 ZNF160Q9HCG1 818 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 TBL2Q9Y4P3 447 aaKnown RBP13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 REV3LO60673 3130 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 COL5A1P20908 1838 aaPredicted RBP13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 RBFOX3A6NFN3 312 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 E9PLN8 166 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 ETV2O00321 342 aaPredicted RBP13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 LINC01565O15544 149 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 DHRS3O75911 302 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 PF4V1P10720 104 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 HINT1P49773 126 aaPredicted RBP13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 GNMTQ14749 295 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 LGI3Q8N145 548 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 OR1L3Q8NH93 324 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 ELOVL5Q9NYP7 299 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 ZNF581Q9P0T4 197 aa13.96□□□□□ -0.17
COL4A3BP-204ENST00000405807 THADAQ6YHU6 1953 aa13.96□□□□□ -0.18
COL4A3BP-204ENST00000405807 MED19A0JLT2 244 aaPredicted RBP13.96□□□□□ -0.18
COL4A3BP-204ENST00000405807 G3V3Y1 287 aa13.96□□□□□ -0.18
COL4A3BP-204ENST00000405807 TRAF3IP2O43734 574 aaPredicted RBP13.96□□□□□ -0.18
COL4A3BP-204ENST00000405807 IGLV3-1P01715 115 aa13.96□□□□□ -0.18
COL4A3BP-204ENST00000405807 IL24Q13007 206 aa13.96□□□□□ -0.18
COL4A3BP-204ENST00000405807 TMEM37Q8WXS4 190 aa13.96□□□□□ -0.18
COL4A3BP-204ENST00000405807 CACNG8Q8WXS5 425 aa13.96□□□□□ -0.18
COL4A3BP-204ENST00000405807 Q96M66 194 aa13.96□□□□□ -0.18
COL4A3BP-204ENST00000405807 LIME1Q9H400 295 aa13.96□□□□□ -0.18
COL4A3BP-204ENST00000405807 PGPEP1Q9NXJ5 209 aa13.96□□□□□ -0.18
COL4A3BP-204ENST00000405807 A0A1W2PPC4 97 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 OR5B21A6NL26 309 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 GJE1A6NN92 205 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 POM121L2Q96KW2 1035 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 MMP17Q9ULZ9 603 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 SLC45A2Q9UMX9 530 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 RCL1Q9Y2P8 373 aaKnown RBP13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 PPIAL4EA0A075B759 164 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 PPIAL4CA0A0B4J2A2 164 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 A0A1W2PRS3 328 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 C5orf63A6NC05 138 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 PPIAL4DF5H284 164 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 SYNGR4O95473 234 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 PPIAL4FP0DN26 164 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 GUCA1AP43080 201 aaPredicted RBP13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 PAX2Q02962 417 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 ZNF266Q14584 549 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 OR4A47Q6IF82 309 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 OR1N2Q8NGR9 330 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 PIGTQ969N2 578 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 OXGR1Q96P68 337 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 C12orf49Q9H741 205 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 BET1LQ9NYM9 111 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 NXT1Q9UKK6 140 aaKnown RBP13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 PIGLQ9Y2B2 252 aa13.95□□□□□ -0.18
COL4A3BP-204ENST00000405807 IGHV3-20A0A0C4DH32 117 aa13.94□□□□□ -0.18
COL4A3BP-204ENST00000405807 GAGE12BA1L429 117 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms